Vol 59, No 4 (2014)
- Year: 2014
- Published: 15.08.2014
- Articles: 9
- URL: https://virusjour.crie.ru/jour/issue/view/113
A problem of the HIV drug resistance
Abstract
The wide use of the highly active antiretroviral therapy (HAART) of HIV infection leads to the HIV drug resistance. The simultaneous formation of the resistance to different groups of antiviral drugs compromises the efficacy of HAART. Thus, the problem of the drug resistance becomes of an enormous significance. In this review, a definition of the resistance is given; the problem of the drug-resistant strains transmission is discussed; the assays used for resistance testing are described; recommendations for the antiviral drug-resistance testing are given.
Problems of Virology. 2014;59(4):5-9
5-9
Taxonomic status of the Burana virus (BURV) (Bunyaviridae, Nairovirus, Tamdy group) isolated from the ticks Haemaphysalis punctata Canestrini et Fanzago, 1877 and Haem. concinna Koch, 1844 (Ixodidae, 10 Haemaphysalinae) in Kyrgyzstan
Abstract
Complete genome sequence of the Burana virus (BURV) was determined using the next-generation sequencing approach (ID GenBank KF801651). The prototype strain of BURV LEIV-Krg760 was originally isolated from the ticks Haemaphysalis punctata Canestrini et Fanzago, 1877 (Ixodidae, Haemaphysalinae), collected from cows in Tokmak wildlife sanctuary, eastern part of the Chu valley (43°10' N, 74°40' E) near Burana village, Kirgizia, in April 1971. Molecular genetics and phylogenetic analyses showed that the BURV belonged to the Nairovirus genus, Bunyaviridae and is related to Tamdy virus (TAMV) that is also associated with the ixodidae ticks of pasture biocenosis in Central Asia. Previous studies showed that TAMV is the prototypic virus of new phylogenetic Tamdy group in the Nairovirus genus. Thus, BURV was classified as a new virus of the Tamdy group, Nairovirus, Bunyaviridae.
Problems of Virology. 2014;59(4):10-15
10-15
Genetic characterization of the Syr-Darya valley fever virus (SDVFV) (Picornaviridae, Cardiovirus) isolated from the blood of the patients and ticks Hyalomma as. asiaticum (Hyalomminae), Dermacentor daghestanicus (Rhipicephalinae) (Ixodidae) and Ornithodoros coniceps (Argasidae) in Kazakhstan and Turkmenistan
Abstract
The Syr-Darya valley fever virus (SDVFV) was originally isolated from the blood of the patient with fever in the Kyzylorda province, Kazakhstan, in July 1973 and was classified to the Cardiovirus genus (fam. Picornaviridae). Later, SDVFV was isolated from the ticks Hyalomma as. asiaticum Schulze et Schlottke, 1929 (Hyalomminae) (1 strain) and Dermacentor daghestanicus Olenev, 1929 (Rhipicephalinae) (7 strains), collected in the floodplains of the Syr-Darya river and the ili river. in this paper, complet genome of the SDVFV (strain LEIV-Tur2833) was sequenced using the next-generation sequencing approach (GenBank ID: KJ191558). It was demonstrated that, phylogenetically, the SDVFV is closely related closest to the Theiler’s murine encephalomyelitis virus (TMEV) and Vilyuisk human encephalomyelitis virus (VMEV). The similarity of the sDVFV with VHEV and TMEV based on P1 region of the polyprotein-precursor (structural proteins VP1-VP4), reaches 75% and 91% for nucleotide sequences and 80% and 93% for putative amino acid sequences, respectively. For nonstructural proteins regions P2 (2A-2C) and P3 (3A-3D) similarity of SDVFV with TMEV and VHEV is 96%-98%.
Problems of Virology. 2014;59(4):15-19
15-19
Molecular genetic characterization of the Gissar virus (GSRV) (Bunyaviridae, Phlebovirus, Uukuniemi group) isolated from the ticks Argas reflexus Fabricius, 1794 (Argasidae) collected in dovecote in Tajikistan
Abstract
The Gissar virus (GSRV) was originally isolated from the ticks Argas reflexus, Fabricius, 1794 collected in a dovecote of Gissar village in Tajikistan (38°40' N, 68°40' E). Using electron microscopy, GSRV was classified to Bunyaviridae without referring to genus due to the absence of the antigenic relation with known bunyaviruses. In the present paper genome of GSRV was sequenced (Miseq, illumina). Molecular genetics and phylogenetic analysis showed. GSRV has a high level of homology with the Grand Arbaud Virus (GAV) (94% for nucleocapsid protein, 87.5% for RdRp, and 82% for the envelope proteins GnGc) isolated from the ticks A. Reflexus in a dovecote in France. GSRV and GAV have a narrow ecological niche associated with the icks A. Reflexus and birds (predominantly Columbidae). According to the conducted study, GSRV is classified as the topotypic for Central Asia variant of GAV, Uukuniemi group, genuses of the Phlebovirus (Bunyaviridae) (ID GenBank KJ425423, KJ425424, KJ425425).
Problems of Virology. 2014;59(4):20-24
20-24
Genetic characterization of the Wad Medani virus (WMV) (Reoviridae, Orbivirus), isolated from the ticks Hyalomma asiaticum Schulze et Schlottke, 1930 (Ixodidae: Hyalomminae) in Turkmenistan, Kazakhstan, and Armenia and from the ticks H. anatolicum Koch, 1844 in Tajikistan
Abstract
Near full-genome sequence of the Wad Medani Virus (WMV) (strain LEIV-8066Tur) (Orbivirus, Reoviridae) isolated from the ticks Hyalomma asiaticum Schulze et Schlottke, 1929, collected from sheep in Baharly district in Turkmenistan, was determined using next generation sequencing approach. The similarity of the RNA-dependent RNA-polymerase (Pol, VP1) amino acid sequence between WMV and the Kemerovo group orbiviruses (KEMV), as well as of the Baku virus (BAKV), was 64%. The similarity of the conserved structural protein VP3 (T2) of WMV with mosquito-borne and tick-borne orbiviruses reaches 46% and 67%, respectively. For the surface proteins VP2, VP5, and VP7 (T13), which have major antigenic determinants of orbiviruses, the similarity of WMV with tick-borne orbiviruses (KEMV and BAKV) is 26-30%, 45% and, 57%, respectively (ID GenBank: KJ425426-35).
Problems of Virology. 2014;59(4):25-30
25-30
Molecular epidemiological analysis of the HIV infection in the Blagoveshchensk and Khabarovsk Area (Russian Far East)
Abstract
The results of the molecular-epidemiological analysis of the HIV-1 variants circulating in Blagoveshchensk and Khabarovsk (Russian Far east) were presented. In Blagoveshchensk HIV-1 IDU-A variants were dominated (92.5%), similar to the regions of the european part of Russia. In Khabarovsk the heterogeneity of circulating HIV-1 variants was noted. In addition to IDU-A variants (66.0%), the strains of subtype B (12.6%), c (4.4%) and recombinant strain form CRF02_AG (17.0%) were identified. Using the phylogenetic analysis method the version of the penetration of HIV-1 variants from china and Japan was not supported.
Problems of Virology. 2014;59(4):31-36
31-36
The supression of a Herpes simplex virus reproduction with drug resistance by combination 15lys-bis-nt and Phosphate of acycloguanosine with some antiherpetic drugs
Abstract
Antiherpetic activity of the double and triple combinations, including original connections 15Lys-bis-Nt and phosphate of acycloguanosine (P-ACG), was studied in vitro. For the first time, it was demonstrated that in case of their combined use with known antiherpetic agents, whose activity does not depend on TK of HSV (PFA, AraA, CDV, Rib, GLN, a-IFN), synergistic or additive effects of interaction was observed. The antiviral effect of the tested combinations was studied on the model of ACG-resistant viral strain. The tested combinations could be of interest for practical medicine.
Problems of Virology. 2014;59(4):37-41
37-41
Variants of the immunoreactivity and infectious process in bank vole (Myodes glareolus) experimentally infected with the Hantavirus Puumala (PUUV)
Abstract
As a result of a longitudinal study of the Puumala hantavirus (PUUV) in the experimentally infected bank voles (Myodes glareolus), we revealed three groups of the voles differing in the immunoreactivity and viral antigen concentration in the organs. The close correlation between these parameters suggested the existence of various mechanisms of the hantavirus persistence in the host.
Problems of Virology. 2014;59(4):42-46
42-46
Pathogenicity of Noncytophatic Isolates of Bovine Viral Diarrhea Virus in Experimentally Infected Seronegative Calves
Abstract
The results of experimental infection of seronegative calves with three non-cytopathogenic (NCP) isolates of BVDV isolated from cattle with different clinical manifestations of the disease belonging to genotype 1 (subgenotype 1a, 1b and 1d) are presented. All tested isolates showed the virulence for seronegative calves 4 to 6 months of age. Belonging to biotype did not correlate with the ability of the virus to infect the lymphoid tissues and to induce leukopenia. All isolates of the virus led to “transiting” leukopenia (up to 2880-3800 kl/mm3) for 8-10 days after infection. Isolate cluster 1d was more virulent and caused the development of a mild respiratory syndrome and short-term diarrhea. The virulence was “strain-dependent”.
Problems of Virology. 2014;59(4):46-49
46-49