Prediction of phenotype R5/X4 of HIV-1 variants circulating in Russia, by using computer methods


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Abstract

The paper presents the data of a comparative analysis of various bioinformation methods for evaluating the tropism of HIV-1 subtype A that is typical of Russia. The prevalence of CXCR4- and CCR5-tropic viruses among the variants prevailing in Russia was studied using the B-PSSM (sinsi) prediction method. No X4-tropic variants were found among 124 samples of HIV-1 isolated from the Russian patients not receiving antiretrovirus therapy.

References

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Copyright (c) 2009 Vasil'ev A.V., Kazennova E.V., Bobkova M.R., Vasilyev A.V., Kazennova Y.V., Bobkova M.R.

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