Molecular genetic echovirus 9 variants identified in patients with aseptic meningitis in Russia in 2007-2009


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Abstract

In 2009 echovirus 9 caused a higher seasonal incidence of enterovirus infection (EVI) and its several outbreaks in a number of regions of Russia. Analysis of the partial VP1 coding region differentiated 4 phylogenetic lineages of echoviruses 9 variants identified in patients with aseptic meningitis and EVI in 2007-2009. One variant of echovirus 9 was most commonly encountered in 2009. Echoviruses 9 identified in different areas, which had a high (98.2-100%) homology of nucleotide sequences of the partial VP1 coding region, varied in the amino acid sequences within the B-C loop.

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Copyright (c) 2011 Golitsyna L.N., Fomina S.G., Novikova N.A., Epifanova N.V., Parfenova O.V., Lukovnikova L.B., Zverev V.V., Ponomareva N.V., Mazepa V.N., Grigor'eva G.I., Efimov E.I., Golitsyna L.N., Fomina S.G., Novikova N.A., Epifanova N.V., Parfenova O.V., Lukovnikova L.B., Zverev V.V., Ponomareva N.V., Mazepa V.N., Grigoryeva G.I., Efimov E.I.

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