The detection of picobirnavirus by RNA electrophoresis in polyacrylamide gel


Cite item

Full Text

Abstract

Double-segment profiles typical of picobirnavirus (PBV) were detected (during 1994-2001) in nucleic acids extracted from feces of children (3 cases) and calf (1 case) with diarrhea by using the method of electrophoresis. The human genomic PBV segments migrated in the polyacrylamide gel (PAAG) as dsRNA segments sized 1.7 and 2.4 kbp for small and large segments, respectively; the similar calf sizes were 1.5 and 2.6 kbp. PBVs were detected in various places of the Nizhny Novgorod Region and at different time periods. It was for the first time that the PBV circulation was proven to be present in Russia's territory. However, their association with diarrhea was not reliably established, and the pathogenic PBV potential needs further investigations.

References

  1. Королев М. Б. Электронно-микроскопические методы выявления вирусов // ВИНИТИ. Итоги науки и техники. Сер.: Вирусология. - М., 1980. - Т. 9. - С. 114-151.
  2. Машатис Т., Фрич Э., Сэмбрук Дж. Молекулярное клонирование: Пер. с англ. - М., 1984.
  3. Новикова Н. А., Епифанова Н. В. Детекция ротавирусов человека с использованием электрофоретического анализа нуклеиновых кислот (ЭФАНК): Метод, рекомендации. - Н. Новгород, 1994.
  4. Browning G. F., Chalmers R. М., Snodgrass D. R. et al. The prevalence of enteric pathogens in diarrheic thoroughbred foals in Britain and Ireland // Equine Vet. J. - 1991. - Vol. 23. - P. 405-409.
  5. Cascio A., Bosco M., Vizzi E. et al. Identification of picobimaviras from faeces of Italian children suffering from acute diarrhea // Eur. J. Epidemiol. - 1996. - Vol. 12. - P. 545-547.
  6. Chandra R. Picobirnavirus, a novel group of undescribed viruses of mammals and birds: a minireview // Acta Virol. - 1997. - Vol. 41. - P. 59-62.
  7. Estes M. K., Cohen J. Rotavirus gene structure and function // Microbiol. Rev. - 1989. - Vol. 53. - P. 410-449.
  8. Gallimore C., Lewis D., Brown D. Detection and chracterization of a novel bisegmented double-stranded RNA virus (picobirnavirus) from rabbit faeces // Arch. Virol. - 1993. - Vol. 133. - P. 63-73.
  9. Gallimore С. I., Appleton H., Lewis D. et al. Detection and characterisation of bisegmented double-stranded RNA viruses (picobimaviruses) in human faecal specimens // J. Med. Virol. - 1995. - Vol. 45. - P. 135-140.
  10. Giordano M. O., Martinez L. C., Rinaldi D. et al. Detection of picobirnavirus in HIV-infected patients with diarrhea in Argentina // J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. - 1998. - Vol. 18. - P. 380-383.
  11. Giordano M. O., Martinez L. C., Rinaldi D. et al. Diarrhea and enteric emerging viruses in HIV-infected patients //AIDS Res. Hum. Retroviruses. - 1999. - Vol. 15. - P. 1427-1432.
  12. Gonzalez G. G., Pujol F. H., Liprandi F. et al. Prevalence of enteric viruses in human immunodeficiency virus seropositive patients in Venezuela // J. Med. Virol. - 1998. - Vol. 55. - P. 288-289.
  13. Green J., Gallimore С. I., Clewley J. P., Brown D. W. Genomic characterisation of the large segment of a rabbit picobirnavirus and comparison with the atypical picobirnavirus of Cryptosporidium parvum // Arch. Virol. - 1999. - Vol. 144. - P. 2457-2465.
  14. Grohmann G. S., Glass R. L., Pereira H. G. et al. Enteric viruses and diarrhea in HIV-infected patients // N. Engl. J. Med. - 1993. - Vol. 329. - P. 14-20.
  15. Ludert J. E., Hidalgo M., Gil F., Liprandi F. Identification in porcine faeces of a novel virus with a bisegmented double stranded RNA genome // Arch. Virol. - 1991. - Vol. 117. - P. 97 107.
  16. Ludert J. E., Liprandi F. Identification of viruses with bi- and trisegmented double-stranded RNA genome in faeces of children with gastroenteritis // Res. Virol. - 1993. - Vol. 144. - P. 219-224.
  17. Pereira H. G., Flewett Т. Н., Candeias J. A., Barth О. М. A virus with a bisegmented douible-stranded RNA genome in rat (Oryzomys nigripes) intestines // J. Gen. Virol. - 1988. - Vol. 69. - P. 2749-2754.
  18. Pereira H. G., Linhares A. C., Candeias J. A., Glass R. I. National laboratory surveillance of viral agents of gastroenteritis in Brazil // Bull. Pan Am. Hlth Organ. - 1993. - Vol. 27. P. 224-233.
  19. Rosen B. I., Fang Z. Y., Glass R. I., Monroe S. S. Cloning of human picobirnavirus genomic segments and development of an RT-PCR detection assay // Virology. - 2000. - Vol. 277. P. 316-329.

Supplementary files

Supplementary Files
Action
1. JATS XML

Copyright (c) 2003 Novikova N.A., Epifanova N.V., Fyodorova О.F., Golitsyna L.N., Kupriyanova N.V.

Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 International License.

СМИ зарегистрировано Федеральной службой по надзору в сфере связи, информационных технологий и массовых коммуникаций (Роскомнадзор).
Регистрационный номер и дата принятия решения о регистрации СМИ: серия ПИ № ФС77-77676 от 29.01.2020.


This website uses cookies

You consent to our cookies if you continue to use our website.

About Cookies