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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="review-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Problems of Virology</journal-id><journal-title-group><journal-title xml:lang="en">Problems of Virology</journal-title><trans-title-group xml:lang="ru"><trans-title>Вопросы вирусологии</trans-title></trans-title-group></journal-title-group><issn publication-format="print">0507-4088</issn><issn publication-format="electronic">2411-2097</issn><publisher><publisher-name xml:lang="en">Central Research Institute for Epidemiology</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">16848</article-id><article-id pub-id-type="doi">10.36233/0507-4088-366</article-id><article-id pub-id-type="edn">hoolym</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>REVIEWS</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>ОБЗОРЫ</subject></subj-group><subj-group subj-group-type="article-type"><subject>Review Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Viruses that heal: harnessing bacteriophages in the era of antibiotic resistance</article-title><trans-title-group xml:lang="ru"><trans-title>Лечебные вирусы: использование бактериофагов в эпоху антибиотикорезистентности</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-6031-4827</contrib-id><name-alternatives><name xml:lang="en"><surname>Awotundun</surname><given-names>Theresa A.</given-names></name><name xml:lang="ru"><surname>Авотундун</surname><given-names>Тереза Абимбола</given-names></name></name-alternatives><address><country country="NG">Nigeria</country></address><bio xml:lang="en"><p>Ph. D.,<bold> </bold>Lecturer,<bold> </bold>Department of Microbiology</p></bio><bio xml:lang="ru"><p>канд. биол. наук, преподаватель кафедры микробиологии</p></bio><email>theresa.awotundun@oouagoiwoye.edu.ng</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-0404-7634</contrib-id><name-alternatives><name xml:lang="en"><surname>Samson</surname><given-names>Oyindamola J.</given-names></name><name xml:lang="ru"><surname>Сэмсон</surname><given-names>Ойиндамола Джон</given-names></name></name-alternatives><address><country country="NG">Nigeria</country></address><bio xml:lang="en"><p>M. Sc., Assistant Lecturer, Department of Microbiology</p></bio><bio xml:lang="ru"><p>магистр, ассистент преподавателя кафедры микробиологии</p></bio><email>oyindamola.samson@oouagoiwoye.edu.ng</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-0924-3549</contrib-id><name-alternatives><name xml:lang="en"><surname>Olanbiwoninu</surname><given-names>Afolake A.</given-names></name><name xml:lang="ru"><surname>Оланбивонину</surname><given-names>Афолаке Атинуке</given-names></name></name-alternatives><address><country country="NG">Nigeria</country></address><bio xml:lang="en"><p>Ph. D., Professor, Department of Microbiology and Biotechnology</p></bio><bio xml:lang="ru"><p>канд. биол. наук, профессор кафедры микробиологии и биотехнологии</p></bio><email>aa.olanbiwoninu@acu.edu.ng</email><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Olabisi Onabanjo University</institution></aff><aff><institution xml:lang="ru">Университет Олабиси Онабанджо</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Ajayi Crowther University</institution></aff><aff><institution xml:lang="ru">Университет Аджайи Кроутера</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2026-05-08" publication-format="electronic"><day>08</day><month>05</month><year>2026</year></pub-date><volume>71</volume><issue>2</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>91</fpage><lpage>108</lpage><history><date date-type="received" iso-8601-date="2026-01-07"><day>07</day><month>01</month><year>2026</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2026, Awotundun T.A., Samson O.J., Olanbiwoninu A.A.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2026, Авотундун Т.А., Сэмсон О.Д., Оланбивонину А.А.</copyright-statement><copyright-year>2026</copyright-year><copyright-holder xml:lang="en">Awotundun T.A., Samson O.J., Olanbiwoninu A.A.</copyright-holder><copyright-holder xml:lang="ru">Авотундун Т.А., Сэмсон О.Д., Оланбивонину А.А.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://virusjour.crie.ru/jour/article/view/16848">https://virusjour.crie.ru/jour/article/view/16848</self-uri><abstract xml:lang="en"><p>The global rise in antimicrobial resistance (AMR) poses an urgent threat to public health, and novel alternatives to traditional antibiotics are needed. One of the most promising options is bacteriophages, viruses that infect and destroy bacteria. Once overshadowed by the discovery of antibiotics, phage therapy is now regaining attention, driven by advances in genomics, synthetic biology, and targeted medicine. This review examines the biology, diversity, and therapeutic use of bacteriophages in treating bacterial infections, especially those caused by multidrug-resistant pathogens. It also discusses how phages act through natural mechanisms, such as lytic enzymes (holins, endolysins, and muralysins), and highlights new genetic engineering techniques, such as CRISPR-Cas systems, phage recombineering, and synthetic genome reboots. In addition to clinical applications, we evaluate phages as biocontrol agents for food safety, environmental sanitation, and biofilm management. Additionally, the article explores key issues in phage therapy, including regulatory frameworks, formulation stability, dynamics of phage-host resistance, and the importance of rapid diagnosis. When properly integrated into modern health and biotechnology practices, bacteriophages offer significant potential and a sustainable solution to the global challenge of antimicrobial resistance.</p></abstract><trans-abstract xml:lang="ru"><p>Глобальный рост антимикробной резистентности (АМР) представляет собой серьезную угрозу для здоровья населения, в связи с чем возникает острая необходимость в новых альтернативах традиционным антибиотикам. Одним из наиболее перспективных вариантов являются бактериофаги – вирусы, которые поражают и уничтожают бактерии. Фаготерапия, некогда отошедшая на второй план после открытия антибиотиков, в настоящее время вновь привлекает к себе внимание благодаря достижениям в области геномики, синтетической биологии и персонализированной медицины. В данном обзоре рассматриваются биология, разнообразие и терапевтическое применение бактериофагов при лечении бактериальных инфекций, особенно вызванных патогенами с множественной лекарственной устойчивостью. В обзоре также обсуждаются естественные механизмы действия фагов, такие как литические ферменты (холины, эндолизины и мурализины), и подчеркиваются новые методы генной инженерии – CRISPR-Cas, рекомбинирование фагов и перезагрузка синтетического генома. Помимо клинического применения, фаги оцениваются как средства биологического контроля для обеспечения безопасности пищевых продуктов, санитарного состояния окружающей среды и борьбы с биопленками. Кроме того, в статье исследуются ключевые вопросы фаготерапии, включая нормативную базу, стабильность препаратов, динамику резистентности фагов и хозяев, а также важность быстрой диагностики. При правильном внедрении в современную практику здравоохранения и биотехнологии бактериофаги обладают значительным потенциалом и представляют собой устойчивое решение глобальной проблемы антимикробной резистентности.</p></trans-abstract><kwd-group xml:lang="en"><kwd>bacteriophage</kwd><kwd>phage therapy</kwd><kwd>antibiotic resistance</kwd><kwd>genetic engineering</kwd><kwd>infection control</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>бактериофаг</kwd><kwd>фаговая терапия</kwd><kwd>антимикробная резистентность</kwd><kwd>генная инженерия</kwd><kwd>профилактика инфекций</kwd></kwd-group><funding-group/></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Gupta J., Verma A. MICROBIOLOGY: The Science to the World of Microbes. In: Gupta J., Verma A., eds. Microbiology-2.0 Update for a Sustainable Future. Singapore: Springer; 2024. https://doi.org/10.1007/978-981-99-9617-9_1</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Weiland-Bräuer N. Friends or foes-microbial interactions in nature. Biology (Basel). 2021; 10(6): 496. https://doi.org/10.3390/biology10060496</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Gordillo Altamirano F.L., Barr J.J. Unlocking the next generation of phage therapy: the key is in the receptors. Curr. Opin. Biotechnol. 2021; 68: 115–23. https://doi.org/10.1016/j.copbio.2020.10.002</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>GBD 2021 Antimicrobial Resistance Collaborators. Global burden of bacterial antimicrobial resistance 1990-2021: a systematic analysis with forecasts to 2050. Lancet. 2024; 404(10459): 1199–226. https://doi.org/10.1016/S0140-6736(24)01867-1</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Paneri M., Sevta P. Overview of antimicrobial resistance: an emerging silent pandemic. Glob. J. Med. Pharm. Biomed. Update. 2023; 18: 11. https://doi.org/10.25259/GJMPBU_153_2022</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Salam M.A., Al-Amin M.Y., Salam M.T., Pawar J.S., Akhter N., Rabaan A.A., et al. Antimicrobial resistance: a growing serious threat for global public health. Healthcare (Basel). 2023; 11(13): 1946. https://doi.org/10.3390/healthcare11131946</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Flynn C.E., Guarner J. Emerging antimicrobial resistance. Mod. Pathol. 2023; 36(9): 100249. https://doi.org/10.1016/j.modpat.2023.100249</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Alara J.A., Alara O.R. An overview of the global alarming increase of multiple drug resistant: A major challenge in clinical diagnosis. Infect. Disord. Drug Targets. 2024; 24(3): e250723219043. https://doi.org/10.2174/1871526523666230725103902</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Mithuna R., Tharanyalakshmi R., Jain I., Singhal S., Sikarwar D., Das S., et al. Emergence of antibiotic resistance due to the excessive use of antibiotics in medicines and feed additives: A global scenario with emphasis on the Indian perspective. Emerg. Contam. 2024; 10(4): 100389. https://doi.org/10.1016/j.emcon.2024.100389</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Muteeb G., Rehman M.T., Shahwan M., Aatif M. Origin of antibiotics and antibiotic resistance, and their impacts on drug development: a narrative review. Pharmaceuticals (Basel). 2023; 16(11): 1615. https://doi.org/10.3390/ph16111615</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Fatima Z., Purkait D., Rehman S., Rai S., Hameed S. Multidrug resistance: A threat to antibiotic era. In: Biological and Environmental Hazards, Risks, and Disasters. Elsevier; 2023: 197–220. https://doi.org/10.1016/B978-0-12-820509-9.00014-9</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Endale H., Mathewos M., Abdeta D. Potential causes of spread of antimicrobial resistance and preventive measures in one health perspective-a review. Infect. Drug Resist. 2023; 16: 7515–45. https://doi.org/10.2147/idr.s428837</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>WHO. Antimicrobial resistance; 2023. Available at: https://who.int/news-room/fact-sheets/detail/antimicrobial-resistance</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>WHO. Bacteriophages and their use in combating antimicrobial resistance; 2025. Available at: https://who.int/europe/news-room/fact-sheets/item/bacteriophages-and-their-use-in-combating-antimicrobial-resistance</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Schooley R.T. Exploring bacteriophage therapy for drug-resistant bacterial infections. Top. Antivir. Med. 2023; 31(1): 23–30.</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Samir S. Bacteriophages as therapeutic agents: alternatives to antibiotics. Recent Pat. Biotechnol. 2021; 15(1): 25–33. https://doi.org/10.2174/1872208315666210121094311</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Taati Moghadam M., Amirmozafari N., Shariati A., Hallajzadeh M., Mirkalantari S., Khoshbayan A., et al. How phages overcome the challenges of drug resistant bacteria in clinical infections. Infect. Drug Resist. 2020; 13: 45–61. https://doi.org/10.2147/IDR.S234353</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Mohanty A., Shaw B., Pradeep N., Singh N.K., Venkateswaran K. Exploring the potential of bacteriophages on Earth and beyond. J. Indian Inst. Sci. 2023; 103: 711–20. https://doi.org/10.1007/s41745-023-00361-0</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Batinovic S., Wassef F., Knowler S.A., Rice D.T.F., Stanton C.R., Rose J., et al. Bacteriophages in natural and artificial environments. Pathogens. 2019; 8(3): 100. https://doi.org/10.3390/pathogens8030100</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Olawade D.B., Fapohunda O., Egbon E., Ebiesuwa O.A., Usman S.O., Faronbi A.O., et al. Phage therapy: A targeted approach to overcoming antibiotic resistance. Microb. Pathog. 2024; 197: 107088. https://doi.org/10.1016/j.micpath.2024.107088</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Khorsheed S.A. The impact of microorganisms on our environment and our life. GSC Biol. Pharm. Sci. 2023; 28(03): 248–52. https://doi.org/10.30574/gscbps.2024.28.3.0334</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Shu W.S., Huang L.N. Microbial diversity in extreme environments. Nat. Rev. Microbiol. 2022; 20(4): 219–35. https://doi.org/10.1038/s41579-021-00648-y</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Gupta A., Gupta R., Singh R.L. Microbes and Environment. In: Singh R., eds. Principles and Applications of Environmental Biotechnology for a Sustainable Future. Applied Environmental Science and Engineering for a Sustainable Future. Singapore: Springer; 2017: 43–84. https://doi.org/10.1007/978-981-10-1866-4_3</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Pfeifer K., Ergal İ., Koller M., Basen M., Schuster B., Rittmann S.K.R. Archaea biotecnology. Biotechnol. Adv. 2021; 47: 107668. https://doi.org/10.1016/j.biotechadv.2020.107668</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Eme L., Spang A., Lombard J., Stairs C.W., Ettema T.J.G. Archaea and the origin of eukaryotes. Nat. Rev. Microbiol. 2017; 15(12): 711–23. https://doi.org/10.1038/nrmicro.2017.133</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Morton J.B. Principles and Applications of Soil Microbiology: Fungi. 3rd Edition. Elsevier; 2021.</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Esteban G.F., Fenchel T.M. What is a protozoon? In: Ecology of Protozoa. Cham: Springer; 2020. https://doi.org/10.1007/978-3-030-59979-9_1</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Bajpai P. Characteristics of Algae. In: Third Generation Biofuels. SpringerBriefs in Energy. Singapore: Springer; 2019. https://doi.org/10.1007/978-981-13-2378-2_3</mixed-citation></ref><ref id="B29"><label>29.</label><mixed-citation>Sarsan S., Pandiyan A., Rodhe A.V., Jagavat, S. Synergistic interactions among microbial communities. In: Singh R.P., Manchanda G., Bhattacharjee K., Panosyan H., eds. Microbes in Microbial Communities. Singapore: Springer; 2021. https://doi.org/10.1007/978-981-16-5617-0_1</mixed-citation></ref><ref id="B30"><label>30.</label><mixed-citation>Weiland-Bräuer N. Symbiotic interactions of archaea in animal and human microbiomes. Curr. Clin. Micro Rpt. 2023; 10(4): 161–73. https://doi.org/10.1007/s40588-023-00204-7</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Dicks L.M.T., Vermeulen W. Bacteriophage–host interactions and the therapeutic potential of bacteriophages. Viruses. 2024; 16(3): 478. https://doi.org/10.3390/v16030478</mixed-citation></ref><ref id="B32"><label>32.</label><mixed-citation>Ayaz M., Li C.H., Ali Q., Zhao W., Chi Y.K., Shafiq M., et al. Bacterial and fungal biocontrol agents for plant disease protection: journey from lab to field, current status, challenges, and global perspectives. Molecules. 2023; 28(18): 6735. https://doi.org/10.3390/molecules28186735</mixed-citation></ref><ref id="B33"><label>33.</label><mixed-citation>Li J., Wang C., Liang W., Liu S. Rhizosphere microbiome: the emerging barrier in plant-pathogen interactions. Front. Microbiol. 2021; 12: 772420. https://doi.org/10.3389/fmicb.2021.772420</mixed-citation></ref><ref id="B34"><label>34.</label><mixed-citation>Carolus H., Van Dyck K., Van Dijck P. Candida albicans and Staphylococcus species: a threatening twosome. Front. Microbiol. 2019; 10: 2162. https://doi.org/10.3389/fmicb.2019.02162</mixed-citation></ref><ref id="B35"><label>35.</label><mixed-citation>Ireland T. The Good Virus: The Amazing Story and Forgotten Promise of the Phage. WW Norton &amp; Company; 2023.</mixed-citation></ref><ref id="B36"><label>36.</label><mixed-citation>Williamson K.E. Viruses. In: Principles and Applications of Soil Microbiology. 3rd Edition. Elsevier; 2021. https://doi.org/10.1016/B978-0-12-820202-9.00009-5</mixed-citation></ref><ref id="B37"><label>37.</label><mixed-citation>Turner D., Kropinski A.M., Adriaenssens E.M. A roadmap for genome-based phage taxonomy. Viruses. 2021; 13(3): 506. https://doi.org/10.3390/v13030506</mixed-citation></ref><ref id="B38"><label>38.</label><mixed-citation>Adriaenssens E.M., Sullivan M.B., Knezevic P., van Zyl L.J., Sarkar B.L., Dutilh B.E., et al. Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee. Arch. Virol. 2020; 165(5): 1253–60. https://doi.org/10.1007/s00705-020-04577-8</mixed-citation></ref><ref id="B39"><label>39.</label><mixed-citation>Zinke M., Schröder G.F., Lange A. Major tail proteins of bacteriophages of the order Caudovirales. J. Biol. Chem. 2022; 298(1): 101472. https://doi.org/10.1016/j.jbc.2021.101472</mixed-citation></ref><ref id="B40"><label>40.</label><mixed-citation>Chevallereau A., Pons B.J., van Houte S., Westra E.R. Interactions between bacterial and phage communities in natural environments. Nat. Rev. Microbiol. 2022; 20(1): 49–62. https://doi.org/10.1038/s41579-021-00602-y</mixed-citation></ref><ref id="B41"><label>41.</label><mixed-citation>Kortright K.E., Chan B.K., Koff J.L., Turner P.E. Phage therapy: a renewed approach to combat antibiotic-resistant bacteria. Cell Host Microbe. 2019; 25(2): 219–32. https://doi.org/10.1016/j.chom.2019.01.014</mixed-citation></ref><ref id="B42"><label>42.</label><mixed-citation>Ibarra-Chávez R., Hansen M.F., Pinilla-Redondo R., Seed K.D., Trivedi U. Phage satellites and their emerging applications in biotechnology. FEMS Microbiol. Rev. 2021; 45(6): fuab031. https://doi.org/s10.1093/femsre/fuab031</mixed-citation></ref><ref id="B43"><label>43.</label><mixed-citation>Vandamme E.J., Mortelmans K. A century of bacteriophage research and applications: impacts on biotechnology, health, ecology and the economy. J. Chem. Technol. Biotechnol. 2019; 94(2): 323–42. https://doi.org/10.1002/jctb.5810</mixed-citation></ref><ref id="B44"><label>44.</label><mixed-citation>Friedman A., Lai X. Combination therapy for cancer with oncolytic virus and checkpoint inhibitor: a mathematical model. PLoS One. 2018; 13(2): e0192449. https://doi.org/10.1371/journal.pone.0192449</mixed-citation></ref><ref id="B45"><label>45.</label><mixed-citation>McMinn B.R., Ashbolt N.J., Korajkic A. Bacteriophages as indicators of faecal pollution and enteric virus removal. Lett. Appl. Microbiol. 2017; 65(1): 11–26. https://doi.org/10.1111/lam.12736</mixed-citation></ref><ref id="B46"><label>46.</label><mixed-citation>Arredondo-Hernandez L.J., Diaz-Avalos C., Lopez-Vidal Y., Castillo-Rojas G., Mazari-Hiriart M. FRNA bacteriophages as viral indicators of faecal contamination in Mexican tropical aquatic systems. PLoS One. 2017; 2(1): e0170399. https://doi.org/10.1371/journal.pone.0170399</mixed-citation></ref><ref id="B47"><label>47.</label><mixed-citation>Parent K.N., Erb M.L., Cardone G., Nguyen K., Gilcrease E.B., Porcek N.B., et al. OmpA and OmpC are critical host factors for bacteriophage Sf6 entry in Shigella. Mol. Microbiol. 2014; 92(1): 47–60. https://doi.org/10.1111/mmi.12536</mixed-citation></ref><ref id="B48"><label>48.</label><mixed-citation>Jakhetia R., Verma N.K. Identiﬁcation and molecular characterisation of a novel mu-like bacteriophage SfMu, of Shigella flexneri. PLoS One. 2015; 10(4): e0124053. https://doi.org/10.1371/journal.pone.0124053</mixed-citation></ref><ref id="B49"><label>49.</label><mixed-citation>Faruque S.M., Bin Naser I., Fjihara K., Diraphat P., Chowdhury, N., Kamruzzaman M., et al. Genomic sequence and receptor for the Vibrio cholerae phage KSF-1Φ: evolutionary divergence among filamentous vibriophages mediating lateral gene transfer. Journal of bacteriology, 2005; 187(12): 4095-4103. https://doi.org/10.1128/jb.187.12.4095-4103.2005</mixed-citation></ref><ref id="B50"><label>50.</label><mixed-citation>Das B., Martínez E., Midonet C., Barre F.X. Integrative mobile elements exploiting Xer recombination. Trends Microbiol. 2013; 21(1): 23–30. https://doi.org/10.1016/j.tim.2012.10.003</mixed-citation></ref><ref id="B51"><label>51.</label><mixed-citation>Pattnaik A., Pati S., Samal S.K. Bacteriophage as a potential biotherapeutics to combat present-day crisis of multi-drug resistant pathogens. Heliyon. 2024; 10(18): e37489. https://doi.org/10.1016/j.heliyon.2024.e37489</mixed-citation></ref><ref id="B52"><label>52.</label><mixed-citation>Seed K.D., Faruque S.M., Mekalanos J.J., Calderwood S.B., Qadri F., Camilli A. Phase variable O antigen biosynthetic genes control expression of the major protective antigen and bacteriophage receptor in Vibrio cholerae O1. PLoS Pathog. 2012; 8(9): 1002917. https://doi.org/10.1371/journal.ppat.1002917</mixed-citation></ref><ref id="B53"><label>53.</label><mixed-citation>Morita M., Tanji Y., Mizoguchi K., Akitsu T., Kijima N., Unno H. Characterization of a virulent bacteriophage specific for Escherichia coli O157:H7 and analysis of its cellular receptor and two tail fiber genes. FEMS Microbiol. Lett. 2002; 211(1): 77–83. https://doi.org/10.1111/j.1574-6968.2002.tb11206.x</mixed-citation></ref><ref id="B54"><label>54.</label><mixed-citation>Perry L.L., SanMiguel P., Minocha U., Terekhov A.I., Shroyer M.L., Farris L.A., et al. Sequence analysis of Escherichia coli O157:H7 bacteriophage Î¦V10 and identification of a phage-encoded immunity protein that modifies the O157 antigen. FEMS Microbiol. Lett. 2009; 292(2): 182–6. https://doi.org/10.1111/j.1574-6968.2009.01511.x</mixed-citation></ref><ref id="B55"><label>55.</label><mixed-citation>Schmidt A., Rabsch W., Broeker N.K., Barbirz S. Bacteriophage tailspike protein based assay to monitor phase variable glucosylations in Salmonella O-antigens. BMC Microbiol. 2016; 16(1): 207. https://doi.org/10.1186/s12866-016-0826-0</mixed-citation></ref><ref id="B56"><label>56.</label><mixed-citation>Sørensen M.C., van Alphen L.B., Harboe A., Li J., Christensen B.B., Szymanski C.M., et al. Bacteriophage F336 recognizes the capsular phosphoramidate modification of Campylobacter jejuni NCTC11168. J. Bacteriol. 2011; 193(23): 6742–9. https://doi.org/10.1128/jb.05276-11</mixed-citation></ref><ref id="B57"><label>57.</label><mixed-citation>Baldvinsson S.B., Sørensen M.C., Vegge C.S., Clokie M.R., Brøndsted L. Campylobacter jejuni motility is required for infection of the flagellotropic bacteriophage F341. Appl. Environ. Microbiol. 2014; 80(22): 7096–106. https://doi.org/10.1128/aem.02057-14</mixed-citation></ref><ref id="B58"><label>58.</label><mixed-citation>Le S., He X., Tan Y., Huang G., Zhang L., Lux R., et al. Mapping the tail fiber as the receptor binding protein responsible for differential host specificity of Pseudomonas aeruginosa Bacteriophages PaP1 and JG004. PLoS One. 2013; 8(7): e68562. https://doi.org/10.1371/journal.pone.0068562</mixed-citation></ref><ref id="B59"><label>59.</label><mixed-citation>Pan X., Cui X., Zhang F., He Y., Li L., Yang H. Genetic evidence for O-specific antigen as receptor of Pseudomonas aeruginosa phage K8 and its genomic analysis. Frontiers in microbiology. 2016; 2(7): 252.</mixed-citation></ref><ref id="B60"><label>60.</label><mixed-citation>Gillis A., Mahillon J. Phages preying on Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis: past, present and future. Viruses. 2014; 6(7): 2623–72. https://doi.org/10.3390/v6072623</mixed-citation></ref><ref id="B61"><label>61.</label><mixed-citation>Bishop-Lilly K.A., Plaut R.D., Chen P.E., Akmal A., Willner K.M., Butani A., et al. Whole genome sequencing of phage resistant Bacillus anthracis mutants reveals an essential role for cell surface anchoring protein CsaB in phage AP50c adsorption. Virol. J. 2012; 9: 246. https://doi.org/10.1186/1743-422x-9-246</mixed-citation></ref><ref id="B62"><label>62.</label><mixed-citation>Xia G., Corrigan R.M., Winstel V., Goerke C., Gründling A., Peschel A. Wall teichoic acid-dependent adsorption of staphylococcal siphovirus and myovirus. J. Bacteriol. 2011; 193(15): 4006–9. https://doi.org/10.1128/jb.01412-10</mixed-citation></ref><ref id="B63"><label>63.</label><mixed-citation>Kaneko J., Narita-Yamada S., Wakabayashi Y., Kamio Y. Identification of ORF636 in phage SLT carrying Panton-Valentine leukocidin genes, acting as an adhesion protein for a poly(glycerophosphate) chain of lipoteichoic acid on the cell surface of Staphylococcus aureus. J. Bacteriol. 2009; 191(14): 4674–80. https://doi.org/10.1128/JB.01793-08</mixed-citation></ref><ref id="B64"><label>64.</label><mixed-citation>Bielmann R., Habann M., Eugster M.R., Lurz R., Calendar R., Klumpp J., et al. Receptor binding proteins of Listeria monocytogenes bacteriophages A118 and P35 recognize serovar-specific teichoic acids. Virology. 2015; 477: 110–8. https://doi.org/10.1016/j.virol.2014.12.035</mixed-citation></ref><ref id="B65"><label>65.</label><mixed-citation>Cisek A.A., Dąbrowska I., Gregorczyk K.P., Wyżewski Z. Phage therapy in bacterial infections treatment: one hundred years after the discovery of bacteriophages. Curr. Microbiol. 2017; 74(2): 277–83. https://doi.org/10.1007/s00284-016-1166-x</mixed-citation></ref><ref id="B66"><label>66.</label><mixed-citation>Liu H., Hu Z., Li M., Yang Y., Lu S., Rao X. Therapeutic potential of bacteriophage endolysins for infections caused by Gram-positive bacteria. J. Biomed. Sci. 2023; 30(1): 29. https://doi.org/10.1186/s12929-023-00919-1</mixed-citation></ref><ref id="B67"><label>67.</label><mixed-citation>Boroujeni M.B., Mohebi S., Malekian A., Shahraeini S.S., Gharagheizi Z., Shahkolahi S., et al. The therapeutic effect of engineered phage, derived protein and enzymes against superbug bacteria. Biotechnol. Bioeng. 2024; 121(1): 82–99. https://doi.org/10.1002/bit.28581</mixed-citation></ref><ref id="B68"><label>68.</label><mixed-citation>Kaur R., Sethi N. Phage therapy as an alternative treatment in the fight against AMR: real-world problems and possible futures. In: Akhtar N., Singh K.S., Prerna, Goyal D., eds. Emerging Modalities in Mitigation of Antimicrobial Resistance. Cham: Springer; 2022. https://doi.org/10.1007/978-3-030-84126-3_15</mixed-citation></ref><ref id="B69"><label>69.</label><mixed-citation>Hussain W., Yang X., Ullah M., Wang H., Aziz A., Xu F., et al. Genetic engineering of bacteriophages: Key concepts, strategies, and applications. Biotechnol. Adv. 2023; 64: 108116. https://doi.org/10.1016/j.biotechadv.2023.108116</mixed-citation></ref><ref id="B70"><label>70.</label><mixed-citation>Azam A.H., Tan X.E., Veeranarayanan S., Kiga K., Cui L. Bacteriophage technology and modern medicine. Antibiotics (Basel). 2021; 10(8): 999. https://doi.org/10.3390/antibiotics10080999</mixed-citation></ref><ref id="B71"><label>71.</label><mixed-citation>Pires D.P., Cleto S., Sillankorva S., Azeredo J., Lu T.K. Genetically engineered phages: a review of advances over the last decade. Microbiol. Mol. Boil. Rev. 2016; 80(3): 523–43. https://doi.org/10.1128/MMBR.00069-15</mixed-citation></ref><ref id="B72"><label>72.</label><mixed-citation>Twort F.W. An investigation on the nature of ultra-microscopic viruses. Lancet. 1915; 186: 1241–3. https://doi.org/10.1016/S0140-6736(01)20383-3</mixed-citation></ref><ref id="B73"><label>73.</label><mixed-citation>d’Hérelle F. Sur un microbe invisible antagoniste des bacilles dysentériques. C R Acad. Sci. Ser. D. 1917; 165: 373–5.</mixed-citation></ref><ref id="B74"><label>74.</label><mixed-citation>Bruynoghe R., Maisin J. Essais de thérapeutique au moyen du bacteriophage. C R Soc. Biol. 1921; 85: 1120–1.</mixed-citation></ref><ref id="B75"><label>75.</label><mixed-citation>d’Hérelle F. Le bactériophage: son rôle dans l’immunité. Paris: Masson et Cie; 1921.</mixed-citation></ref><ref id="B76"><label>76.</label><mixed-citation>Gordillo Altamirano F.L., Barr J.J. Phage therapy in the postantibiotic era. Clin. Microbiol. Rev. 2019; 32(2): e00066-18. https://doi.org/10.1128/CMR.00066-18</mixed-citation></ref><ref id="B77"><label>77.</label><mixed-citation>Chanishvili N. Bacteriophages as therapeutic and prophylactic means: summary of the Soviet and post Soviet experiences. Curr. Drug Deliv. 2016; 13(3): 309–23. https://doi.org/10.2174/156720181303160520193946</mixed-citation></ref><ref id="B78"><label>78.</label><mixed-citation>Wittebole X., De Roock S., Opal S.M. A historical overview of bacteriophage therapy as an alternative to antibiotics for the treatment of bacterial pathogens. Virulence. 2014; 5(1): 226–35. https://doi.org/10.4161/viru.25991</mixed-citation></ref><ref id="B79"><label>79.</label><mixed-citation>Chen Y., Batra H., Dong J., Chen C., Rao V.B., Tao P. Genetic engineering of bacteriophages against infectious diseases. Front. Microbiol. 2019; 10: 954. https://doi.org/10.3389/fmicb.2019.00954</mixed-citation></ref><ref id="B80"><label>80.</label><mixed-citation>Cao B., Li Y., Yang T., Bao Q., Yang M., Mao C. Bacteriophage-based biomaterials for tissue regeneration. Adv. Drug Deliv. Rev. 2019; 145: 73–95. https://doi.org/10.1016/j.addr.2018.11.004</mixed-citation></ref><ref id="B81"><label>81.</label><mixed-citation>Ramirez-Chamorro L., Boulanger P., Rossier O. Strategies for bacteriophage T5 mutagenesis: expanding the toolbox for phage genome engineering. Front. Microbiol. 2021; 12: 667332. https://doi.org/10.3389/fmicb.2021.667332</mixed-citation></ref><ref id="B82"><label>82.</label><mixed-citation>Kilcher S., Loessner M.J. Engineering bacteriophages as versatile biologics. Trends Microbiol. 2018; 27(4): 355–67. https://doi.org/10.1016/j.tim.2018.09.006</mixed-citation></ref><ref id="B83"><label>83.</label><mixed-citation>Lenneman B.R., Fernbach J., Loessner M.J., Lu T.K., Kilcher S. Enhancing phage therapy through synthetic biology and genome engineering. Curr. Opin. Biotechnol. 2021; 68: 151–9. https://doi.org/10.1016/j.copbio.2020.11.003</mixed-citation></ref><ref id="B84"><label>84.</label><mixed-citation>Jaschke P.R., Lieberman E.K., Rodriguez J., Sierra A., Endy D. A fully decompressed synthetic bacteriophage øX174 genome assembled and archived in yeast. Virology. 2012; 434(2): 278–84. https://doi.org/10.1016/j.virol.2012.09.020</mixed-citation></ref><ref id="B85"><label>85.</label><mixed-citation>Kilcher S., Studer P., Muessner C., Klumpp J., Loessner M.J. Cross-genus rebooting of custom-made, synthetic bacteriophage genomes in L-form bacteria. Proc. Natl Acad. Sci. USA. 2018; 115(3): 567–72. https://doi.org/10.1073/pnas.1714658115</mixed-citation></ref><ref id="B86"><label>86.</label><mixed-citation>Kouprina N., Larionov V. Transformation-associated recombination (TAR) cloning for genomics studies and synthetic biology. Chromosoma, 2016; 125(4): 621–32. https://doi.org/10.1007/s00412-016-0588-3</mixed-citation></ref><ref id="B87"><label>87.</label><mixed-citation>Payaslian F., Gradaschi V., Piuri M. Genetic manipulation of phages for therapy using BRED. Curr. Opin. Biotechnol. 2021; 68: 8–14. https://doi.org/10.1016/j.copbio.2020.09.005</mixed-citation></ref><ref id="B88"><label>88.</label><mixed-citation>Marinelli L.J., Hatfull G.F., Piuri M. Recombineering: a powerful tool for modification of bacteriophage genomes. Bacteriophage. 2012; 2(1): 5–14. https://doi.org/10.4161/bact.18778</mixed-citation></ref><ref id="B89"><label>89.</label><mixed-citation>Marinelli L.J., Piuri M., Swigonová Z., Balachandran A., Oldfield L.M., van Kessel J.C., et al. BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomes. PLoS One. 2008; 3(12): e3957. https://doi.org/10.1371/journal.pone.0003957</mixed-citation></ref><ref id="B90"><label>90.</label><mixed-citation>Dedrick R.M., Guerrero-Bustamante C.A., Garlena R.A., Russell D.A., Ford K., Harris K., et al. Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus. Nat. Med. 2019; 25(5): 730–3. https://doi.org/10.1038/s41591-019-0437-z</mixed-citation></ref><ref id="B91"><label>91.</label><mixed-citation>Milho C., Sillankorva S. Implication of a gene deletion on a Salmonella Enteritidis phage growth parameters. Virus Res. 2022; 308: 198654. https://doi.org/10.1016/j.virusres.2021.198654</mixed-citation></ref><ref id="B92"><label>92.</label><mixed-citation>Li M., Lin H., Jing Y., Wang J. Broad-host-range Salmonella bacteriophage STP4-a and its potential application evaluation in poultry industry. Poult. Sci. 2020; 99(7): 3643–54. https://doi.org/10.1016/j.psj.2020.03.051</mixed-citation></ref><ref id="B93"><label>93.</label><mixed-citation>Loose M., Sáez Moreno D., Mutti M., Hitzenhammer E., Visram Z., Dippel D., et al. Natural bred ε2-phages have an improved host range and virulence against uropathogenic Escherichia coli over their ancestor phages. Antibiotics (Basel). 2021; 10(11): 1337. https://doi.org/10.3390/antibiotics10111337</mixed-citation></ref><ref id="B94"><label>94.</label><mixed-citation>Jensen J.D., Parks A.R., Adhya S., Rattray A.J., Court D.L. λ recombineering used to engineer the genome of phage T7. Antibiotics (Basel). 2020; 9(11): 805. https://doi.org/10.3390/antibiotics9110805</mixed-citation></ref><ref id="B95"><label>95.</label><mixed-citation>Pan Y.J., Lin T.L., Chen C.C., Tsai Y.T., Cheng Y.H., Chen Y.Y., et al. Klebsiella phage ΦK64-1 encodes multiple depolymerases for multiple host capsular types. J. Virol. 2017; 91(6): e02457-16. https://doi.org/10.1128/jvi.02457-16</mixed-citation></ref><ref id="B96"><label>96.</label><mixed-citation>Robb G.B. Genome editing with CRISPR‐Cas: an overview. Curr. Protoc. Essent. Lab. Tech. 2019; 19(1): e36. https://doi.org/10.1002/cpet.36</mixed-citation></ref><ref id="B97"><label>97.</label><mixed-citation>Bari S.M.N., Walker F.C., Cater K., Aslan B., Hatoum-Aslan A. Strategies for editing virulent staphylococcal phages using CRISPR-Cas10. ACS Synth. Biol. 2017; 6(12): 2316–25. https://doi.org/10.1021/acssynbio.7b00240</mixed-citation></ref><ref id="B98"><label>98.</label><mixed-citation>Box A.M., McGuffie M.J., O’Hara B.J., Seed K.D. Functional analysis of bacteriophage immunity through a type IE CRISPR-Cas system in Vibrio cholerae and its application in bacteriophage genome engineering. J. Bacteriol. 2016; 198(3): 578–90. https://doi.org/10.1128/jb.00747-15</mixed-citation></ref><ref id="B99"><label>99.</label><mixed-citation>Zheng Y., Li Y., Zhou K., Li T., VanDusen N.J., Hua Y. Precise genome-editing in human diseases: mechanisms, strategies and applications. Signal Transduct. Target. Ther. 2024; 9(1): 47. https://doi.org/10.1038/s41392-024-01750-2</mixed-citation></ref><ref id="B100"><label>100.</label><mixed-citation>Kiro R., Shitrit D., Qimron U. Efficient engineering of a bacteriophage genome using the type I-E CRISPR-Cas system. RNA Biol. 2014; 11(1): 42–4.</mixed-citation></ref><ref id="B101"><label>101.</label><mixed-citation>Hupfeld M., Trasanidou D., Ramazzini L., Klumpp J., Loessner M.J., Kilcher S. A functional type II-A CRISPR–Cas system from Listeria enables efficient genome editing of large non-integrating bacteriophage. Nucleic Acids Res. 2018; 46(13): 6920–33. https://doi.org/10.1093/nar/gky544</mixed-citation></ref><ref id="B102"><label>102.</label><mixed-citation>Varble A., Meaden S., Barrangou R., Westra E.R., Marraffini L.A. Recombination between phages and CRISPR−cas loci facilitates horizontal gene transfer in staphylococci. Nat. Microbiol. 2019; 4(6): 956–63. https://doi.org/10.1038/s41564-019-0400-2</mixed-citation></ref><ref id="B103"><label>103.</label><mixed-citation>Bhargava K., Nath G., Bhargava A., Aseri G.K., Jain N. Phage therapeutics: from promises to practices and prospectives. Appl. Microbiol. Biotechnol. 2021; 105(24): 9047–67. https://doi.org/10.1007/s00253-021-11695-z</mixed-citation></ref><ref id="B104"><label>104.</label><mixed-citation>Domingo-Calap P., Delgado-Martínez J. Bacteriophages: protagonists of a post-antibiotic era. Antibiotics (Basel). 2018; 7(3): 66. https://doi.org/10.3390/antibiotics7030066</mixed-citation></ref><ref id="B105"><label>105.</label><mixed-citation>Esmael A., Azab E., Gobouri A.A., Nasr-Eldin M.A., Moustafa M.M.A., Mohamed S.A., et al. Isolation and characterization of two lytic bacteriophages infecting a multi-drug resistant salmonella typhimurium and their efficacy to combat salmonellosis in ready-to-use foods. Microorganism. 2021; 9(2): 423. https://doi.org/10.3390/microorganisms9020423</mixed-citation></ref><ref id="B106"><label>106.</label><mixed-citation>Eskenazi A., Lood C., Wubbolts J., Hites M., Balarjishvili N., Leshkasheli L., et al. Combination of pre-adapted bacteriophage therapy and antibiotics for treatment of fracture-related infection due to pandrug-resistant Klebsiella pneumoniae. Nat. Commun. 2022; 13(1): 302. https://doi.org/10.1038/s41467-021-27656-z</mixed-citation></ref><ref id="B107"><label>107.</label><mixed-citation>Chang R.Y.K., Chen K., Wang J., Wallin M., Britton W., Morales S., et al. Proof-of-principle study in a murine lung infection model of antipseudomonal activity of phage PEV20 in a dry-powder formulation. Antimicrob. Agents Chemother. 2018; 62(2): e01714-17. https://doi.org/10.1128/aac.01714-17</mixed-citation></ref><ref id="B108"><label>108.</label><mixed-citation>Galtier M., De Sordi L., Sivignon A., de Vallée A., Maura D., Neut C., et al. Bacteriophages targeting adherent invasive Escherichia coli strains as a promising new treatment for Crohn’s disease. J. Crohn’s Colitis. 2017; 11(7): 840–7. https://doi.org/10.1093/ecco-jcc/jjw224</mixed-citation></ref><ref id="B109"><label>109.</label><mixed-citation>Peng C., Hanawa T., Azam A.H., LeBlanc C., Ung P., Matsuda T., et al. Silviavirus phage ɸMR003 displays a broad host range against methicillin-resistant Staphylococcus aureus of human origin. Appl. Microbiol. Biotechnol. 2019; 103(18): 7751–65. https://doi.org/10.1007/s00253-019-10039-2</mixed-citation></ref><ref id="B110"><label>110.</label><mixed-citation>Li P., Li Z., Peng W., Li X., Guo G., Chen L., et al. Antimicrobial potential of a novel K5-specific phage and its recombinant strains against Klebsiella pneumoniae in milk. Journal of dairy science. 2025; 108(7): 6788-6802. https://doi.org/10.3168/jds.2024-25895</mixed-citation></ref><ref id="B111"><label>111.</label><mixed-citation>Abedon S.T. Commentary: phage therapy of staphylococcal chronic osteomyelitis in experimental animal model. Front. Microbiol. 2016; 7: 1251. https://doi.org/10.3389/fmicb.2016.01251</mixed-citation></ref><ref id="B112"><label>112.</label><mixed-citation>Kishor C., Mishra R.R., Saraf S.K., Kumar M., Srivastav A.K., Nath G. Phage therapy of staphylococcal chronic osteomyelitis in experimental animal model. Indian J. Med. Res. 2016; 143(1): 87–94. https://doi.org/10.4103/0971-5916.178615</mixed-citation></ref><ref id="B113"><label>113.</label><mixed-citation>Moghadam M.T., Khoshbayan A., Chegini Z., Farahani I., Shariati A. Bacteriophages, a new therapeutic solution for inhibiting multidrug-resistant bacteria causing wound infection: lesson from animal models and clinical trials. Drug Des. Dev. Ther. 2020; 14: 1867–83. https://doi.org/10.2147/DDDT.S251171</mixed-citation></ref><ref id="B114"><label>114.</label><mixed-citation>Kraus S., Fletcher M.L., Łapińska U., Chawla K., Baker E., Attrill E.L., et al. Phage-induced efflux down-regulation boosts antibiotic efficacy. PLoS Pathog. 2024; 20(6): e1012361. https://doi.org/10.1371/journal.ppat.1012361</mixed-citation></ref><ref id="B115"><label>115.</label><mixed-citation>Al-Anany A.M., Fatima R., Nair G., Mayol J.T., Hynes A.P. Temperate phage-antibiotic synergy across antibiotic classes reveals new mechanism for preventing lysogeny. mBio. 2024; 15(6): e0050424. https://doi.org/10.1128/mbio.00504-24</mixed-citation></ref><ref id="B116"><label>116.</label><mixed-citation>Azam A.H., Sato K., Miyanaga K., Nakamura T., Ojima S., Kondo K., et al. Selective bacteriophages reduce the emergence of resistant bacteria in bacteriophage-antibiotic combination therapy. Microbiol. Spectr. 2024; 12(6): e0042723. https://doi.org/10.1128/spectrum.00427-23</mixed-citation></ref><ref id="B117"><label>117.</label><mixed-citation>Loganathan A., Bozdogan B., Manohar P., Nachimuthu R. Phage-antibiotic combinations in various treatment modalities to manage MRSA infections. Front. Pharmacol. 2024; 15: 1356179. https://doi.org/10.3389/fphar.2024.1356179</mixed-citation></ref><ref id="B118"><label>118.</label><mixed-citation>Luo J., Liu M., Ai W., Zheng X., Liu S., Huang K., et al. Synergy of lytic phage pB23 and meropenem combination against carbapenem-resistant Acinetobacter baumannii. Antimicrob. Agents Chemother. 2024; 68(6): e0044824. https://doi.org/10.1128/aac.00448-24</mixed-citation></ref><ref id="B119"><label>119.</label><mixed-citation>Chatterjee A., Johnson C.N., Luong P., Hullahalli K., McBride S.W., Schubert A.M., et al. Bacteriophage resistance alters antibiotic-mediated intestinal expansion of Enterococci. Infect. Immun, 2019; 87(6): e00085-19. https://doi.org/10.1128/iai.00085-19</mixed-citation></ref><ref id="B120"><label>120.</label><mixed-citation>Cafora M., Deflorian G., Forti F., Ferrari L., Binelli G., Briani F., et al. Phage therapy against Pseudomonas aeruginosa infections in a cystic fibrosis zebrafish model. Sci. Rep. 2019; 9(1): 1527. https://doi.org/10.1038/s41598-018-37636-x</mixed-citation></ref><ref id="B121"><label>121.</label><mixed-citation>Kakasis A., Panitsa G. Bacteriophage therapy as an alternative treatment for human infections. A comprehensive review. Int. J. Antimicrob. Agents. 2019; 53(1): 16–21. https://doi.org/10.1016/j.ijantimicag.2018.09.004</mixed-citation></ref><ref id="B122"><label>122.</label><mixed-citation>Schooley R.T., Biswas B., Gill J.J., Hernandez-Morales A., Lancaster J., Lessor L., et al. Development and use of personalized bacteriophage-based therapeutic cocktails to treat a patient with a disseminated resistant Acinetobacter baumannii infection. Antimicrob. Agents Chemother. 2017; 61(10): e00954-17. https://doi.org/10.1128/AAC.00954-17</mixed-citation></ref><ref id="B123"><label>123.</label><mixed-citation>Law N., Logan C., Yung G., Furr C.L., Lehman S.M., Morales S., et al. Successful adjunctive use of bacteriophage therapy for treatment of multidrug-resistant Pseudomonas aeruginosa infection in a cystic fibrosis patient. Infection. 2019; 47(4): 665–8. https://doi.org/10.1007/s15010-019-01319-0</mixed-citation></ref><ref id="B124"><label>124.</label><mixed-citation>Edwards S.J.L., Tao Y., Elias R., Schooley R. Considerations for prioritising clinical research using bacteriophage. Essays Biochem. 2024; 68(5): 679–86. https://doi.org/10.1042/EBC20240013</mixed-citation></ref><ref id="B125"><label>125.</label><mixed-citation>Endersen L., Coffey A. The use of bacteriophages for food safety. Curr. Opin. Food Sci. 2020; 36: 1–8. https://doi.org/10.1016/j.cofs.2020.10.006</mixed-citation></ref><ref id="B126"><label>126.</label><mixed-citation>Ahmadi M., Karimi Torshizi M.A., Rahimi S., Dennehy J.J. Prophylactic bacteriophage administration more effective than post-infection administration in reducing Salmonella enterica serovar enteritidis shedding in quail. Front. Microbiol. 2016; 7: 1253. https://doi.org/10.3389/fmicb.2016.01253</mixed-citation></ref><ref id="B127"><label>127.</label><mixed-citation>Ngassam-Tchamba C., Duprez J.N., Fergestad M., De Visscher A., L’Abee-Lund T., De Vliegher S., et al. In vitro and in vivo assessment of phage therapy against Staphylococcus aureus causing bovine mastitis. J. Glob. Antimicrob. Resist. 2020; 22: 762–70. https://doi.org/10.1016/j.jgar.2020.06.020</mixed-citation></ref><ref id="B128"><label>128.</label><mixed-citation>Titze I., Krömker V. Antimicrobial activity of a phage mixture and a lactic acid bacterium against Staphylococcus aureus from bovine mastitis. Vet. Sci. 2020; 7(1): 31. https://doi.org/10.3390/vetsci7010031</mixed-citation></ref><ref id="B129"><label>129.</label><mixed-citation>Geng H., Zou W., Zhang M., Xu L., Liu F., Li X., et al. Evaluation of phage therapy in the treatment of Staphylococcus aureus-induced mastitis in mice. Folia Microbiol. (Praha). 2020; 65(2): 339–51. https://doi.org/10.1007/s12223-019-00729-9</mixed-citation></ref><ref id="B130"><label>130.</label><mixed-citation>Cao Y., Li S., Han S., Wang D., Zhao J., Xu L., et al. Characterization and application of a novel Aeromonas bacteriophage as treatment for pathogenic Aeromonas hydrophila infection in rainbow trout. Aquaculture. 2020; 523: 735193. https://doi.org/10.1016/j.aquaculture.2020.735193</mixed-citation></ref><ref id="B131"><label>131.</label><mixed-citation>Liu A., Liu Y., Peng L., Cai X., Shen L., Duan M., et al. Characterization of the narrow-spectrum bacteriophage LSE7621 towards Salmonella Enteritidis and its biocontrol potential on lettuce and tofu. LWT. 2020; 118: 108791. https://doi.org/10.1016/j.lwt.2019.108791</mixed-citation></ref><ref id="B132"><label>132.</label><mixed-citation>Wong C.W.Y., Delaquis P., Goodridge L., Lévesque R.C., Fong K., Wang S. Inactivation of Salmonella enterica on post-harvest cantaloupe and lettuce by a lytic bacteriophage cocktail. Curr. Res. Food Sci. 2019; 2: 25–32. https://doi.org/10.1016/j.crfs.2019.11.004</mixed-citation></ref><ref id="B133"><label>133.</label><mixed-citation>Deka D., Annapure U.S., Shirkole S.S., Thorat B.N. Bacteriophages: an organic approach to food decontamination. J. Food Process. Preserv. 2022; 46(10): e16101. https://doi.org/10.1111/jfpp.16101</mixed-citation></ref><ref id="B134"><label>134.</label><mixed-citation>Jagannathan B.V., Dakoske M., Vijayakumar P.P. Bacteriophage-mediated control of pre-and post-harvest produce quality and safety. LWT. 2022; 169: 113912. https://doi.org/10.1016/j.lwt.2022.113912</mixed-citation></ref><ref id="B135"><label>135.</label><mixed-citation>Garvey M. Bacteriophages and food production: biocontrol and bio-preservation options for food safety. Antibiotics. 2022; 11(10): 1324. https://doi.org/10.3390/antibiotics11101324</mixed-citation></ref><ref id="B136"><label>136.</label><mixed-citation>Perera M.N., Abuladze T., Li M., Woolston J., Sulakvelidze A. Bacteriophage cocktail significantly reduces or eliminates Listeria monocytogenes contamination on lettuce, apples, cheese, smoked salmon and frozen foods. Food Microbiol. 2015; 52: 42–8. https://doi.org/10.1016/j.fm.2015.06.006</mixed-citation></ref><ref id="B137"><label>137.</label><mixed-citation>Vikram A., Tokman J.I., Woolston J., Sulakvelidze A. Phage biocontrol improves food safety by significantly reducing the level and prevalence of Escherichia coli O157: H7 in various foods. J. Food Prot. 2020; 83(4): 668–76. https://doi.org/10.4315/0362-028x.jfp-19-433</mixed-citation></ref><ref id="B138"><label>138.</label><mixed-citation>Zhang X., Niu Y.D., Nan Y., Stanford K., Holley R., McAllister T., et al. SalmoFresh™ effectiveness in controlling Salmonella on romaine lettuce, mung bean sprouts and seeds. Int. J. Food Microbiol. 2019; 305: 108250. https://doi.org/10.1016/j.ijfoodmicro.2019.108250</mixed-citation></ref><ref id="B139"><label>139.</label><mixed-citation>Sukumaran A.T., Nannapaneni R., Kiess A., Sharma C.S. Reduction of Salmonella on chicken breast fillets stored under aerobic or modified atmosphere packaging by the application of lytic bacteriophage preparation SalmoFreshTM. Poult. Sci. 2016; 95(3): 668–75. https://doi.org/10.3382/ps/pev332</mixed-citation></ref><ref id="B140"><label>140.</label><mixed-citation>EFSA Panel on Biological Hazards (BIOHAZ). Evaluation of the safety and efficacy of Listex™ P100 for reduction of pathogens on different ready‐to‐eat (RTE) food products. EFSA J. 2016; 14(8): e04565. https://doi.org/10.2903/j.efsa.2016.4565</mixed-citation></ref><ref id="B141"><label>141.</label><mixed-citation>D’Accolti M., Soffritti I., Bini F., Mazziga E., Arnoldo L., Volta A., et al. Potential use of a combined bacteriophage–probiotic sanitation system to control microbial contamination and AMR in healthcare settings: a pre-post intervention study. Int. J. Mol. Sci. 2023; 24(7): 6535. https://doi.org/10.3390/ijms24076535</mixed-citation></ref><ref id="B142"><label>142.</label><mixed-citation>Chen Z., Yang Y., Li G., Huang Y., Luo Y., Le S. Effective elimination of bacteria on hard surfaces by the combined use of bacteriophages and chemical disinfectants. Microbiol. Spectr. 2024a; 12(4): e0379723. https://doi.org/10.1128/spectrum.03797-23</mixed-citation></ref><ref id="B143"><label>143.</label><mixed-citation>Azzam M.I., ElSayed E.E., Gado M.M., Korayem A.S. New phage-based wastewater pollution control solution with safe reuse. Environ. Nanotechnol. Monit. Manag. 2024; 21: 100951. https://doi.org/10.1016/j.enmm.2024.100951</mixed-citation></ref><ref id="B144"><label>144.</label><mixed-citation>Shivaram K.B., Bhatt P., Applegate B., Simsek H. Bacteriophage-based biocontrol technology to enhance the efficiency of wastewater treatment and reduce targeted bacterial biofilms. Sci. Total Environ. 2023; 862: 160723. https://doi.org/10.1016/j.scitotenv.2022.160723</mixed-citation></ref><ref id="B145"><label>145.</label><mixed-citation>Reisoglu Ş., Aydin S. Bacteriophages as a promising approach for the biocontrol of antibiotic resistant pathogens and the reconstruction of microbial interaction networks in wastewater treatment systems: A review. Sci. Total Environ. 2023; 890: 164291. https://doi.org/10.1016/j.scitotenv.2023.164291</mixed-citation></ref><ref id="B146"><label>146.</label><mixed-citation>Jeon J., Park J.H., Yong D. Efficacy of bacteriophage treatment against carbapenem-resistant Acinetobacter baumannii in Galleria mellonella larvae and a mouse model of acute pneumonia. BMC Microbiol. 2019; 19(1): 70. https://doi.org/10.1186/s12866-019-1443-5</mixed-citation></ref><ref id="B147"><label>147.</label><mixed-citation>Dufour N., Clermont O., La Combe B., Messika J., Dion S., Khanna V., et al. Bacteriophage LM33_P1, a fast-acting weapon against the pandemic ST131-O25b:H4 Escherichia coli clonal complex. J. Antimicrob. Chemother. 2016; 71(11): 3072–80. https://doi.org/10.1093/jac/dkw253</mixed-citation></ref><ref id="B148"><label>148.</label><mixed-citation>Raz A., Serrano A., Hernandez A., Euler C.W., Fischetti V.A. Isolation of phage lysins that effectively kill pseudomonas aeruginosa in mouse models of lung and skin infection. Antimicrob. Agents Chemother. 2019; 63(7): e00024-19. https://doi.org/10.1128/AAC.00024-19</mixed-citation></ref><ref id="B149"><label>149.</label><mixed-citation>Sasani M.S., Eftekhar F. Potential of a bacteriophage isolated from wastewater in treatment of lobar pneumonia infection induced by Klebsiella pneumoniae in mice. Curr. Microbiol. 2020; 77(10): 2650–5. https://doi.org/10.1007/s00284-020-02041-z</mixed-citation></ref><ref id="B150"><label>150.</label><mixed-citation>Jasim H.N., Hafidh R.R., Abdulamir A.S. Formation of therapeutic phage cocktail and endolysin to highly multi-drug resistant Acinetobacter baumannii: in vitro and in vivo study. Iran. J. Basic Med. Sci. 2018; 21(11): 1100–8. https://doi.org/10.22038/IJBMS.2018.27307.6665</mixed-citation></ref><ref id="B151"><label>151.</label><mixed-citation>Wang C., Li P., Niu W., Yuan X., Liu H., Huang Y., et al. Protective and therapeutic application of the depolymerase derived from a novel KN1 genotype of Klebsiella pneumoniae bacteriophage in mice. Res. Microbiol. 2019; 170(3): 156–64. https://doi.org/10.1016/j.resmic.2019.01.003</mixed-citation></ref><ref id="B152"><label>152.</label><mixed-citation>Alvi I.A., Asif M., Tabassum R., Aslam R., Abbas Z., Rehman S.U. RLP, a bacteriophage of the family Podoviridae, rescues mice from bacteremia caused by multi-drug-resistant Pseudomonas aeruginosa. Arch. Virol. 2020; 165(6): 1289–97. https://doi.org/10.1007/s00705-020-04601-x</mixed-citation></ref><ref id="B153"><label>153.</label><mixed-citation>Lood R., Winer B.Y., Pelzek A.J., Diez-Martinez R., Thandar M., Euler C.W., et al. Novel phage lysin capable of killing the multidrug-resistant gram-negative bacterium Acinetobacter baumannii in a mouse bacteremia model. Antimicrob. Agents Chemother. 2015; 59(4): 1983–91. https://doi.org/10.1128/AAC.04641-14</mixed-citation></ref><ref id="B154"><label>154.</label><mixed-citation>Rouse M.D., Stanbro J., Roman J.A., Lipinski M.A., Jacobs A., Biswas B., et al. Impact of frequent administration of bacteriophage on therapeutic efficacy in an A. baumannii mouse wound infection model. Front. Microbiol. 2020; 11: 414. https://doi.org/10.3389/fmicb.2020.00414</mixed-citation></ref><ref id="B155"><label>155.</label><mixed-citation>Rastogi V., Yadav P., Verma A., Pandit J.K. Ex vivo and in vivo evaluation of microemulsion based transdermal delivery of E. coli specific T4 bacteriophage: A rationale approach to treat bacterial infection. Eur. J. Pharm. Sci. 2017; 107: 168–82. https://doi.org/10.1016/j.ejps.2017.07.014</mixed-citation></ref><ref id="B156"><label>156.</label><mixed-citation>Peez C., Chen B., Henssler L., Chittò M., Onsea J., Verhofstad M.H.J., et al. Evaluating the safety, pharmacokinetics and efficacy of phage therapy in treating fracture-related infections with multidrug-resistant Staphylococcus aureus: intravenous versus local application in sheep. Front. Cell. Infect. Microbiol. 2025; 15: 1547250. https://doi.org/10.3389/fcimb.2025.1547250</mixed-citation></ref><ref id="B157"><label>157.</label><mixed-citation>Jault P., Leclerc T., Jennes S., Pirnay J.P., Que Y.A., Resch G., et al. Efficacy and tolerability of a cocktail of bacteriophages to treat burn wounds infected by Pseudomonas aeruginosa (PhagoBurn): a randomised, controlled, double-blind phase 1/2 trial. Lancet Infect. Dis. 2019; 19(1): 35–45. https://doi.org/10.1016/S1473-3099(18)30482-1</mixed-citation></ref><ref id="B158"><label>158.</label><mixed-citation>Ujmajuridze A., Chanishvili N., Goderdzishvili M., Leitner L., Mehnert U., Chkhotua A., et al. Adapted bacteriophages for treating urinary tract infections. Front. Microbiol. 2018; 9: 1832. https://doi.org/10.3389/fmicb.2018.01832</mixed-citation></ref><ref id="B159"><label>159.</label><mixed-citation>Nir-Paz R., Gelman D., Khouri A., Sisson B.M., Fackler J., Alkalay-Oren S., et al. Successful treatment of antibiotic-resistant, poly-microbial bone infection with bacteriophages and antibiotics combination. Clin. Infect. Dis. 2019; 69(11): 2015–8. https://doi.org/10.1093/cid/ciz222</mixed-citation></ref><ref id="B160"><label>160.</label><mixed-citation>Baquero F., Levin B.R. Proximate and ultimate causes of the bactericidal action of antibiotics. Nat. Rev. Microbiol. 2021; 19(2): 123–32. https://doi.org/10.1038/s41579-020-00443-1</mixed-citation></ref><ref id="B161"><label>161.</label><mixed-citation>Peng H., Borg R.E., Dow L.P., Pruitt B.L., Chen I.A. Controlled phage therapy by photothermal ablation of specific bacterial species using gold nanorods targeted by chimeric phages. Proc. Natl Acad. Sci. USA. 2020; 117(4): 1951–61. https://doi.org/10.1073/pnas.1913234117</mixed-citation></ref><ref id="B162"><label>162.</label><mixed-citation>Akinwotu S.T., Fapohunda O. War against antimicrobial resistance. J. Microbiol. Exp. 2020; 8(4): 148–54. https://doi.org/10.15406/jmen.2020.08.00300</mixed-citation></ref><ref id="B163"><label>163.</label><mixed-citation>Bullen N.P., Johnson C.N., Andersen S.E., Arya G., Marotta S.R., Lee Y.J., et al. An enterococcal phage protein inhibits type IV restriction enzymes involved in antiphage defense. Nat. Commun. 2024; 15(1): 6955. https://doi.org/10.1038/s41467-024-51346-1</mixed-citation></ref><ref id="B164"><label>164.</label><mixed-citation>Chen Q., Zhang F., Bai J., Che Q., Xiang L., Zhang Z., et al. Bacteriophage-resistant carbapenem-resistant Klebsiella pneumoniae shows reduced antibiotic resistance and virulence. Int. J. Antimicrob. Agents. 2024b; 64(2): 107221. https://doi.org/10.1016/j.ijantimicag.2024.107221</mixed-citation></ref><ref id="B165"><label>165.</label><mixed-citation>Żaczek M., Górski A., Skaradzińska A., Łusiak-Szelachowska M., Weber-Dąbrowska B. Phage penetration of eukaryotic cells: practical implications. Future Virol. 2019; 14(11): 745–60. https://doi.org/10.2217/fvl-2019-0110</mixed-citation></ref><ref id="B166"><label>166.</label><mixed-citation>Canning J.S., Laucirica D.R., Ling K.M., Nicol M.P., Stick S.M., Kicic A. Phage therapy to treat cystic fibrosis Burkholderia cepacia complex lung infections: perspectives and challenges. Front. Microbiol. 2024; 15: 1476041. https://doi.org/10.3389/fmicb.2024.1476041</mixed-citation></ref><ref id="B167"><label>167.</label><mixed-citation>Manohar P., Tamhankar A.J., Leptihn S., Ramesh N. Pharmacological and immunological aspects of phage therapy. Infect. Microbes Dis. 2019; 1(2): 34–42. https://doi.org/10.1097/IM9.0000000000000013</mixed-citation></ref><ref id="B168"><label>168.</label><mixed-citation>Tang X., Fan C., Zeng G., Zhong L., Li C., Ren X., et al. Phage-host interactions: the neglected part of biological wastewater treatment. Water Res. 2022; 226: 119183. https://doi.org/10.1016/j.watres.2022.119183</mixed-citation></ref><ref id="B169"><label>169.</label><mixed-citation>Osman A.H., Kotey F.C.N., Odoom A., Darkwah S., Yeboah R.K., Dayie N.T.K.D., et al. The potential of bacteriophage-antibiotic combination therapy in treating infections with multidrug-resistant bacteria. Antibiotics (Basel). 2023; 12(8): 1329. https://doi.org/10.3390/antibiotics12081329</mixed-citation></ref><ref id="B170"><label>170.</label><mixed-citation>Ling H., Lou X., Luo Q., He Z., Sun M., Sun J. Recent advances in bacteriophage-based therapeutics: Insight into the post-antibiotic era. Acta Pharm. Sin. B, 2022; 12(12): 4348–64. https://doi.org/10.1016/j.apsb.2022.05.007</mixed-citation></ref><ref id="B171"><label>171.</label><mixed-citation>Agarwal R., Johnson C.T., Imhoff B.R., Donlan R.M., McCarty N.A., García A.J. Inhaled bacteriophage-loaded polymeric microparticles ameliorate acute lung infections. Nat. Biomed. Eng. 2018; 2(11): 841–9. https://doi.org/10.1038/s41551-018-0263-5</mixed-citation></ref><ref id="B172"><label>172.</label><mixed-citation>Chang R.Y., Wong J., Mathai A., Morales S., Kutter E., Britton W., et al. Production of highly stable spray dried phage formulations for treatment of Pseudomonas aeruginosa lung infection. Eur. J. Pharm. Biopharm. 2017; 121: 1–13. https://doi.org/10.1016/j.ejpb.2017.09.002</mixed-citation></ref><ref id="B173"><label>173.</label><mixed-citation>Leung S.S., Parumasivam T., Gao F.G., Carrigy N.B., Vehring R., Finlay W.H., et al. Production of inhalation phage powders using spray freeze drying and spray drying techniques for treatment of respiratory infections. Pharm. Res. 2016; 33(6): 1486–96. https://doi.org/10.1007/s11095-016-1892-6</mixed-citation></ref><ref id="B174"><label>174.</label><mixed-citation>Mary A.S., Muthuchamy M., Thillaichidambaram M., Lee S., Sivaraj B., Magar S., et al. Formulation of dual-functional nonionic cetomacrogol creams incorporated with bacteriophage and human platelet lysate for effective targeting of MDR P. aeruginosa and enhanced wound healing. ACS Appl. Bio Mater. 2024; 7(10): 6583–93. https://doi.org/10.1021/acsabm.4c00747</mixed-citation></ref><ref id="B175"><label>175.</label><mixed-citation>Chang R.Y.K., Okamoto Y., Morales S., Kutter E., Chan H.K. Topical liquid formulation of bacteriophages for metered-dose spray delivery. Eur. J. Pharm. Biopharm. 2022; 177: 1–8. https://doi.org/10.1016/j.ejpb.2022.05.014</mixed-citation></ref><ref id="B176"><label>176.</label><mixed-citation>Yazdi Z.R., Leaper M.C., Malik D.J. The development of oral solid dosage forms using the direct-compression tableting of spray-dried bacteriophages suitable for targeted delivery and controlled release. Processes. 2023; 11(11): 3146. https://doi.org/10.3390/pr11113146</mixed-citation></ref><ref id="B177"><label>177.</label><mixed-citation>Briot T., Kolenda C., Ferry T., Medina M., Laurent F., Leboucher G., et al. Paving the way for phage therapy using novel drug delivery approaches. J. Control. Release. 2022; 347: 414–24. https://doi.org/10.1016/j.jconrel.2022.05.021</mixed-citation></ref><ref id="B178"><label>178.</label><mixed-citation>Ferriol-González C., Domingo-Calap P. Phages for biofilm removal. Antibiotics (Basel). 2020; 9(5): 268. https://doi.org/10.3390/antibiotics9050268</mixed-citation></ref><ref id="B179"><label>179.</label><mixed-citation>Zhang Y.Q., Ren S.X., Li H.L., Wang Y.X., Fu G., Yang J., et al. Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228). Mol. Microbiol. 2003; 49(6): 1577–93. https://doi.org/10.1046/j.1365-2958.2003.03671.x</mixed-citation></ref><ref id="B180"><label>180.</label><mixed-citation>García R., Latz S., Romero J., Higuera G., García K., Bastías R. Bacteriophage production models: an overview. Front. Microbiol. 2019; 10: 1187. https://doi.org/10.3389/fmicb.2019.01187</mixed-citation></ref><ref id="B181"><label>181.</label><mixed-citation>Regulski K., Champion-Arnaud P., Gabard J. Bacteriophage manufacturing: from early twentieth-century processes to current GMP. In: Harper D., Abedon S., Burrowes B., McConville M., eds. Bacteriophages. Cham: Springer; 2018. https://doi.org/10.1007/978-3-319-40598-8_25-1</mixed-citation></ref><ref id="B182"><label>182.</label><mixed-citation>Pelfrene E., Willebrand E., Cavaleiro Sanches A., Sebris Z., Cavaleri M. Bacteriophage therapy: a regulatory perspective. J. Antimicrob. Chemother. 2016; 71(8): 2071–4. https://doi.org/10.1093/jac/dkw083</mixed-citation></ref><ref id="B183"><label>183.</label><mixed-citation>Pires D.P., Costa A.R., Pinto G., Meneses L., Azeredo J. Current challenges and future opportunities of phage therapy. FEMS Microbiol. Rev. 2020; 44(6): 684–700. https://doi.org/10.1093/femsre/fuaa017</mixed-citation></ref><ref id="B184"><label>184.</label><mixed-citation>Mutti M., Corsini L. Robust approaches for the production of active ingredient and drug product for human phage therapy. Front. Microbiol. 2019; 10: 2289. https://doi.org/10.3389/fmicb.2019.02289</mixed-citation></ref><ref id="B185"><label>185.</label><mixed-citation>Pirnay .JP., Blasdel B.G., Bretaudeau L., Buckling A., Chanishvili N., Clark J.R., et al. Quality and safety requirements for sustainable phage therapy products. Pharm. Res. 2015; 32(7): 2173–9. https://doi.org/10.1007/s11095-014-1617-7</mixed-citation></ref><ref id="B186"><label>186.</label><mixed-citation>Merabishvili M., Pirnay J.P., De Vos D. Guidelines to compose an ideal bacteriophage cocktail. Methods Mol. Biol. 2018; 1693: 99–110. https://doi.org/10.1007/978-1-4939-7395-8_9</mixed-citation></ref><ref id="B187"><label>187.</label><mixed-citation>Malik D.J., Sokolov I.J., Vinner G.K., Mancuso F., Cinquerrui S., Vladisavljevic G.T., et al. Formulation, stabilisation and encapsulation of bacteriophage for phage therapy. Adv. Colloid Interface Sci. 2017; 249: 100–33. https://doi.org/10.1016/j.cis.2017.05.014</mixed-citation></ref><ref id="B188"><label>188.</label><mixed-citation>Dąbrowska K. Phage therapy: What factors shape phage pharmacokinetics and bioavailability? Systematic and critical review. Med. Res. Rev. 2019; 39(5): 2000–25. https://doi.org/10.1002/med.21572</mixed-citation></ref><ref id="B189"><label>189.</label><mixed-citation>Botka T., Pantůček R., Mašlaňová I., Benešík M., Petráš P., Růžičková V., et al. Lytic and genomic properties of spontaneous host-range Kayvirus mutants prove their suitability for upgrading phage therapeutics against staphylococci. Sci. Rep. 2019; 9(1): 5475. https://doi.org/10.1038/s41598-019-41868-w</mixed-citation></ref><ref id="B190"><label>190.</label><mixed-citation>Henry M., Biswas B., Vincent L., Mokashi V., Schuch R., Bishop-Lilly K.A., et al. Development of a high throughput assay for indirectly measuring phage growth using the OmniLog(TM) system. Bacteriophage. 2012; 2(3): 159–67. https://doi.org/10.4161/bact.21440</mixed-citation></ref><ref id="B191"><label>191.</label><mixed-citation>Rajnovic D., Muñoz-Berbel X., Mas J. Fast phage detection and quantification: An optical density-based approach. PloS One. 2019; 14(5): e0216292. https://doi.org/10.1371/journal.pone.0216292</mixed-citation></ref><ref id="B192"><label>192.</label><mixed-citation>Dunsing V., Irmscher T., Barbirz S., Chiantia S. Purely polysaccharide-based biofilm matrix provides size-selective diffusion barriers for nanoparticles and bacteriophages. Biomacromolecules. 2019; 20(10): 3842–54. https://doi.org/10.1021/acs.biomac.9b00938</mixed-citation></ref><ref id="B193"><label>193.</label><mixed-citation>Bull J.J., Christensen K.A., Scott C., Jack B.R., Crandall C.J., Krone S.M. Phage-bacterial dynamics with spatial structure: self organization around phage sinks can promote increased cell densities. Antibiotics (Basel). 2018; 7(1): 8. https://doi.org/10.3390/antibiotics7010008</mixed-citation></ref><ref id="B194"><label>194.</label><mixed-citation>González S., Fernández L., Gutiérrez D., Campelo A.B., Rodríguez A., García P. Analysis of different parameters affecting diffusion, propagation and survival of staphylophages in bacterial biofilms. Front. Microbiol. 2018; 9: 2348. https://doi.org/10.3389/fmicb.2018.02348</mixed-citation></ref><ref id="B195"><label>195.</label><mixed-citation>Hobley L., Harkins C., MacPhee C.E., Stanley-Wall N.R. Giving structure to the biofilm matrix: an overview of individual strategies and emerging common themes. FEMS Microbiol. Rev. 2015; 39(5): 649–69. https://doi.org/10.1093/femsre/fuv015</mixed-citation></ref><ref id="B196"><label>196.</label><mixed-citation>Bernheim A., Sorek R. The pan-immune system of bacteria: antiviral defence as a community resource. Nat. Rev. Microbiol. 2020; 18(2): 113–9. https://doi.org/10.1038/s41579-019-0278-2</mixed-citation></ref><ref id="B197"><label>197.</label><mixed-citation>Rohde C., Wittmann J., Kutter E. Bacteriophages: a therapy concept against multi-drug-resistant bacteria. Surg. Infect. (Larchmt). 2018; 19(8): 737–44. https://doi.org/10.1089/sur.2018.184</mixed-citation></ref><ref id="B198"><label>198.</label><mixed-citation>Tagliaferri T.L., Jansen M., Horz H.P. Fighting pathogenic bacteria on two fronts: phages and antibiotics as combined strategy. Front. Cell. Infect. Microbiol. 2019; 9: 22. https://doi.org/10.3389/fcimb.2019.00022</mixed-citation></ref><ref id="B199"><label>199.</label><mixed-citation>Torres-Barceló C., Hochberg M.E. Evolutionary rationale for phages as complements of antibiotics. Trends Microbiol. 2016; 24(4): 249–56. https://doi.org/10.1016/j.tim.2015.12.011</mixed-citation></ref><ref id="B200"><label>200.</label><mixed-citation>Dion M.B., Oechslin F., Moineau S. Phage diversity, genomics and phylogeny. Nat. Rev. Microbiol. 2020; 18(3): 125–38. https://doi.org/10.1038/s41579-019-0311-5</mixed-citation></ref></ref-list></back></article>
