THE ROLE OF DNA-METHYLTRANSFERASES IN THE LIFE CYCLE OF HEPATITIS B VIRUS AND PATHOGENESIS OF CHRONIC HEPATITIS B

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Abstract

Chronic hepatitis B is caused by a persistent form of hepatitis B virus, covalently closed circular DNA (cccDNA). Stability of cccDNA is associated with intracellular localization of cccDNA and formation of minichromosome, regulated by epigenetic mechanisms. One of the key mechanisms in epigenetics is methylation of DNA on CpG islands. Expression levels of DNA-methyltransferases (DNMTs) in chronic hepatitis B patients were shown to be upregulated. Nevertheless, the role of DNMTs in the life cycle of HBV and their effects on the cell remain elusive. In this review, we discuss latest achievements on the role of DNMTs in chronic hepatitis B and HBV in vitro models.

About the authors

D. S. Kostyushev

Central Research Institute of Epidemiology

Author for correspondence.
Email: dk@rcvh.ru
Россия

A. P. Zueva

Central Research Institute of Epidemiology; M.V. Lomonosov Moscow State University

Email: noemail@neicon.ru
Россия

S. A. Brezgin

Central Research Institute of Epidemiology; I.M. Sechenov First State Medical University

Email: noemail@neicon.ru
Россия

A. D. Lipatnikov

Central Research Institute of Epidemiology; D.I. Mendeleev University of Chemical Technology of Russia

Email: noemail@neicon.ru
Россия

E. V. Volchkova

I.M. Sechenov First State Medical University

Email: noemail@neicon.ru
Россия

V. V. Maleyev

Central Research Institute of Epidemiology

Email: noemail@neicon.ru
Россия

V. P. Chulanov

Central Research Institute of Epidemiology; I.M. Sechenov First State Medical University

Email: noemail@neicon.ru
Россия

References

  1. Sunbul M. Hepatitis B virus genotypes: Global distribution and clinical importance. World J. Gastroenterol. 2014; 20(18): 5427-34.
  2. Ganem D., Prince A.M. Hepatitis B virus infection - natural history and clinical consequences. New Engl. J. Med. 2004; 350(11): 1118-29.
  3. Zoulim F. New insight on hepatitis B virus persistence from the study of intrahepatic viral cccDNA. J. Hepatol. 2005; 42(3): 302-8.
  4. Zhang X., Hou J., Lu M. Regulation of hepatitis B virus replication by epigenetic mechanisms and microRNAs. Front. Genet. 2013; 4: 202.
  5. Liu X., Xu Q., Chen W., Cao H., Zheng R., Li G. Hepatitis B virus DNA-induced carcinogenesis of human normal liver cells by virtue of nonmethylated CpG DNA. Oncol. Rep. 2009; 21(4): 941-7.
  6. Li H., Yang F., Gao B., Yu Z., Liu X., Xie F. et al. Hepatitis B virus infection in hepatocellular carcinoma tissues upregulates expression of DNA methyltransferases. Int. J. Clin. Exp. Med. 2015; 8(3): 4175-85.
  7. Guo Y.H., Li Y.N., Zhao J.R., Zhang J., Yan Z. HBc binds to the CpG islands of HBV cccDNA and promotes an epigenetic permissive state. Epigenetics. 2011; 6(6): 720-6.
  8. Koumbi L., Karayiannis P. The epigenetic control of hepatitis B virus modulates the outcome of infection. Front. Microbiol. 2015; 6: 1491.
  9. Haines K.M., Loeb D.D. The sequence of the RNA primer and the DNA template influence the initiation of plus-strand DNA synthesis in hepatitis B virus. J. Mol. Biol. 2007; 370(3): 471-80.
  10. Wong D.K., Yuen M.F., Yuan H., Sum S.S., Hui C.K., Hall J. et al. Quantitation of covalently closed circular hepatitis B virus DNA in chronic hepatitis B patients. Hepatology. 2004; 40(3): 727-37.
  11. Pollicino T., Belloni L., Raffa G., Pediconi N., Squadrito G., Raimondo G. et al. Hepatitis B virus replication is regulated by the acetylation status of hepatitis B virus cccDNA-bound H3 and H4 histones. Gastroenterology. 2006; 130(3): 823-37.
  12. Belloni L., Pollicino T., De Nicola F., Guerrieri F., Raffa G., Fanciulli M. et al. Nuclear HBx binds the HBV minichromosome and modifies the epigenetic regulation of cccDNA function. Proc. Natl. Acad. Sci. U.S. A. 2009; 106(47): 19975-9.
  13. Bock C.T., Schwinn S., Locarnini S., Fyfe J., Manns M.P., Trautwein C. et al. Structural organization of the hepatitis B virus minichromosome. J. Mol. Biol. 2001; 307(1): 183-96.
  14. Egger G., Liang G., Aparicio A., Jones P.A. Epigenetics in human disease and prospects for epigenetic therapy. Nature. 2004; 429(6990): 457-63.
  15. Jurkowska R., Jeltsch A. Silencing of gene expression by targeted DNA methylation: concepts and approaches. Methods Mol. Biol. 2010; 649: 149-61.
  16. Saito Y., Kanai Y., Sakamoto M., Saito H., Ishii H., Hirohashi S. Expression of mRNA for DNA methyltransferases and methyl-CpG-binding proteins and DNA methylation status on CpG islands and pericentromeric satellite regions during human hepatocarcinogenesis. Hepatology. 2001; 33(3): 561-8.
  17. Vivekanandan P., Thomas D., Torbenson M. Methylation regulates hepatitis B viral protein expression. J. Infect. Dis. 2009; 199(9): 1286-91.
  18. Vivekanandan P., Daniel H.D., Kannangai R., Martinez-Murillo F., Torbenson M. Hepatitis B virus replication induces methylation of both host and viral DNA. J. Virol. 2010; 84(9): 4321-9.
  19. Tian Y., Yang W., Song J., Wu Y., Ni B. Hepatitis B virus X protein-induced aberrant epigenetic modifications contributing to human hepatocellular carcinoma pathogenesis. Mol. Cell. Biol. 2013; 33(15): 2810-6.
  20. Zhu Y.Z., Zhu R., Fan J., Pan Q., Li H., Chen Q. et al. Hepatitis B virus X protein induces hypermethylation of p16(INK4A) promoter via DNA methyltransferases in the early stage of HBV-associated hepatocarcinogenesis. J. Viral. Hepat. 2010; 17(2): 98-107.
  21. Zheng D.L., Zhang L., Cheng N., Xu X., Deng Q., Teng X.M. et al. Epigenetic modification induced by hepatitis B virus X protein via interaction with de novo DNA methyltransferase DNMT3A. J. Hepatol. 2009; 50(2): 377-87.
  22. Zhu Y.Z., Zhu R., Shi L.G., Mao Y., Zheng G.J., Chen Q. et al. Hepatitis B virus X protein promotes hypermethylation of p16(INK4A) promoter through upregulation of DNA methyltransferases in hepatocarcinogenesis. Exp. Mol. Pathol. 2010; 89(3): 268-75.
  23. Vivekanandan P., Kannangai R., Ray S.C., Thomas D.L., Torbenson M. Comprehensive genetic and epigenetic analysis of occult hepatitis B from liver tissue samples. Clin. Infect. Dis. 2008; 46(8): 1227-36.
  24. Guo Y., Li Y., Mu S., Zhang J., Yan Z. Evidence that methylation of hepatitis B virus covalently closed circular DNA in liver tissues of patients with chronic hepatitis B modulates HBV replication. J. Med. Virol. 2009; 81(7): 1177-83.
  25. Vivekanandan P., Thomas D., Torbenson M. Methylation regulates hepatitis B viral protein expression. J. Infect. Dis. 2009; 199(9): 1286-91.
  26. Wei X., Xiang T., Ren G., Tan C., Liu R., Xu X. et al. miR-101 is down-regulated by the hepatitis B virus x protein and induces aberrant DNA methylation by targeting DNA methyltransferase 3A. Cell. Signal. 2013; 25(2): 439-46.
  27. Miller R.H., Robinson W.S. Integrated hepatitis B virus DNA sequences specifying the major viral core polypeptide are methylated in PLC/PRF/5 cells. Proc. Natl. Acad. Sci. U.S. A. 1983; 80(9): 2534-8.
  28. Vivekanandan P., Thomas D., Torbenson M. Hepatitis B viral DNA is methylated in liver tissues. J. Viral. Hepat. 2008; 15(2): 103-7.
  29. Kaur P., Paliwal A., Durantel D., Hainaut P., Scoazec J.Y., Zoulim F. et al. DNA methylation of hepatitis B virus (HBV) genome associated with the development of hepatocellular carcinoma and occult HBV infection. J. Infect. Dis. 2010; 202(5): 700-4.
  30. Kim J.W., Lee S.H., Park Y.S., Hwang J.H., Jeong S.H. et al. Replicative activity of hepatitis B virus is negatively associated with methylation of covalently closed circular DNA in advanced hepatitis B virus infection. Intervirology. 2011; 54(6): 316-25.
  31. Zhang Y., Li C., Zhang Y., Zhu H., Kang Y., Liu H. et al. Comparative Analysis of CpG Islands among HBV Genotypes. PLoS ONE. 2013; 8(2): e56711.
  32. Lin S.C. Hepatitis B Virus Covalently Closed Circular DNA Is Associated with Methylated Histones H3 and H4 and Heterochromatin Complex Proteins: Implication of Their Roles in Viral Replication (Thesis). Hong Kong; 2017.
  33. Hughes D.J., Marendy E.M., Dickerson CA., Yetming K.D., Sample C.E., Sample J.T. Contributions of CTCF and DNA methyltransferases DNMT1 and DNMT3B to epstein-barr virus restricted latency. J. Virol. 2012; 86(2): 1034-45.
  34. Park E.S., Park Y.K., Shin C.Y., Park S.H., Ahn S.H., Kim D.H. et al. Hepatitis B virus inhibits liver regeneration via epigenetic regulation of urokinase-type plasminogen activator. Hepatology. 2013; 58(2): 762-76.
  35. Kim S., Lee H.S., Ji J.H., Cho M.Y., Yoo Y.S., Park Y.Y. et al. Hepatitis B virus X protein activates the ATM-Chk2 pathway and delays cell cycle progression. J. Gen. Virol. 2015; 96(8): 2242-51.
  36. Zhu M., Guo J., Li W., Lu Y., Fu S., Xie X. et al. Hepatitis B virus X protein induces expression of alpha-fetoprotein and activates PI3K/mTOR signaling pathway in liver cells. Oncotarget. 2015; 6(14): 12196-208.
  37. Matsuda Y., Wakai T., Kubota M., Osawa M., Takamura M., Yamagiwa S. et al. DNA Damage Sensor γ-H2AX Is Increased in Preneoplastic Lesions of Hepatocellular Carcinoma. ScientificWorld Journal. 2013; 2013: 597095.
  38. Ha K., Lee G.E., Palii S.S., Brown K.D., Takeda Y., Liu K. et al. Rapid and transient recruitment of DNMT1 to DNA double-strand breaks is mediated by its interaction with multiple components of the DNA damage response machinery. Hum. Mol. Genet. 2011; 20(1): 126-40.
  39. O’Hagan H.M., Wang W., Sen S., Destefano Shields C., Lee S.S., Zhang Y.W. et al. Oxidative damage targets complexes containing DNA methyltransferases, SIRT1 and polycomb members to promoter CpG islands. Cancer. Cell. 2011; 20(5): 606-19.
  40. Jin B., Robertson K.D. DNA Methyltransferases (DNMTs), DNA Damage Repair, and Cancer. Adv. Exp. Med. Biol. 2013; 754: 3-29.
  41. Lucifora J., Xia Y., Reisinger F., Zhang K., Stadler D., Cheng X. et al. Specific and nonhepatotoxic degradation of nuclear hepatitis B virus cccDNA. Science. 2014; 343(6176): 1221-8.
  42. Ran F.A., Hsu P.D., Wright J., Agarwala V., Scott D.A., Zhang F. Genome engineering using the CRISPR-Cas9 system. Nat. Protoc. 2013; 8(11): 2281-308.

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Copyright (c) 2018 Kostyushev D.S., Zueva A.P., Brezgin S.A., Lipatnikov A.D., Volchkova E.V., Maleyev V.V., Chulanov V.P.

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